Gene detail

Detailed information of gene20141.t1 in Actinoscyphia liui Gene info

Gene ID	Annotation	Chromosome	Start	End	Strand
gene20141.t1	L-ASPARAGINASE	chr5	41854117	41862698	+

Gene Structure

More details in Jbrowse Sequence

CDS

Transcript

gene20141.t1

TCAGGCACATTTCGTTTAGCGAAGAGATTCAAGCTAATAAGCTGTTATCCGTCGGAAGGAGGGGTAAATGGCTGGCGATCTAAACTCAGGAATGGAACACATCAGAAGAACGAATGTTCTTCTACTGTATACTGGAGGTGCTCTTGGATGGAAGCTGATACCTGGCGGGTTTCAAGTGGAGAAAAATTTAGTTCTCAATGAGTTGAAGAAACTCCCAACCATGTATGATGCCGAGTATGTGCAGAATATTATGGCAAATATCATGGATGACTTACCAGAGGAGGAGATAAAAGAGGACCAGATTGTCATGCCAGTGTCCAAGTATGGGGTGCGTATATTTATTGATGTCAAAGAAATGACAGAAGACCTGGTAGGACACTCACAAGACATGGACATGAAGGGGTGGTCAAACATTGCCTTGAAAATCAAGCAAAACTACTCCAATTACCATGGCTTTGTCATTCTCCATGGAACAGACACATTATGCTACACAGCCTCTGCATTGTCCTTCATGTTTGAAAACCTTGGCAAATCTGTCATTTTCACTGGCTCACTGTGTCCAATCAATGAGCACCTGACTGATGGGCGTGACAATATTCTTGGTGCAGTGATGATAGCAGGCCATCATGTTATTCCAGAGGTAACAGTGTTCTTTCATGGAAAGCTATATAGAGGCAACCGATGTCTAAAGGTGGACTCAAGAAGCTTTGGAGCATTTGATTCCCCTAATTTTTCTCCATTAGCATCGGTGGAGTCAGGAATAGAAGTTGAATGGGATGAGATATTCCAGTGTAACTTCAGCAGCAAGTTTACTGTGAAAACTAGCCTTGTTCCTCATGTTGGTGTCCTTAGGCTGTTTCCTGGCATCACTATAGCAAATGTGAAAACACTCTTACAGCCCCCCATGCAAGGCGTGGTCTTAGAAACATATGGTGCTGGGAATGGGCCAGACTCGCGCCAAGATATTTTACATGAATTGAAGACTGCATCAGAGAGAGGCGTTATATCTGTTAATTGTACTCAGTGTTTATATGGTGAAGTGGTGGCCTCGTATGCTACAGGAAAGGTTCTTTTTGATGCTGGAGTAATCCCTGGAGCAGACATGACGGTTGAGGCAGCCCTGACAAAGCTTTCCTATGTACTTGGACTGGACGTTACATACGAAGAAAAGAAACGGCTGATGCAATCTAACCTTCGTGGTGAGTTGACTGAACAAAGTAAGAAACATGCAGAGCAGTTTTCCTTGAGAGATAATGAACTGATTGGAAGAGTGGCTTCTAACCTCAAAGTGGGATCCTGTGAGGAAGTACGATATATCAAGCAGGCCTTGTTTCCTGTACTGATGTGTTCTGCTGCTTCCATGGGTGATGTCAACACAGTTGCTGATCTTTGCAACCAGGCTGGAGGGAACCCAAACGCTGCTACAGACTACGATGGGCGTACACCATTACACATTGCCTGTACAGAAGGTCAAGTAGAAGTCGTGAAGTATTTGTTGCTCAGAGGAGCTTCTCCTCATGTCCAAGACAAATACGGCCAAAGACCAATAGACGATGCTATCCAGACTGAGCATGAGGAAATTATTGAACTTCTGTGTGATACTGGAGCTCATGTAGGGCCCATGTCTATGGACACTGCTCGTCTTCTATGCACATGTGCTGCTGAGAACAAGGTTTCCAAGTTAAGGGCGTGGCATTTGGCTGGAGCATGTCTCGATGTAGGCGATTATGATAAAAGAACTCCGTTGCATGTGGCAGTCTGTAGGGGCAATATTGAGGCAGTCACGTTTTTACTAGAGTGTGGTGTAGATGTCAGTGTTAAAGATTTGTATGGCCAATCACCTCTTGATAATGCAAAAGCTTTACAAAACCAAGAAATACTACAACTACTCCAGAATTTCCAGACAAAGGAACCATAATTTCATGTATACTTTGGCATTGATGTAGTTTTAACCTTCATGGCAGGGACCGCGGAGAACTCTCAAAACAATT

Protein

Gene family

Gene family	Subfamily
-	-

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF00710	Asparaginase	Asparaginase, N-terminal	Domain	Interproscan
PF12796	Ank_2	Ankyrin repeats (3 copies)	Repeat	Interproscan
PF17763	Asparaginase_C	Glutaminase/Asparaginase C-terminal domain	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR002110	Repeat	Ankyrin repeat	Interproscan
IPR006034	Family	Asparaginase/glutaminase-like	Interproscan
IPR027473	Homologous_superfamily	L-asparaginase, C-terminal	Interproscan
IPR027474	Domain	L-asparaginase, N-terminal	Interproscan
IPR027475	Active_site	Asparaginase/glutaminase, active site 2	Interproscan
IPR036152	Homologous_superfamily	Asparaginase/glutaminase-like superfamily	Interproscan
IPR036770	Homologous_superfamily	Ankyrin repeat-containing domain superfamily	Interproscan
IPR037152	Homologous_superfamily	L-asparaginase, N-terminal domain superfamily	Interproscan
IPR040919	Domain	Asparaginase/glutaminase, C-terminal	Interproscan
IPR041725	Family	Type I (cytosolic) L-asparaginase	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR11707	L-ASPARAGINASE	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0004067	Molecular Function	asparaginase activity	Interproscan
GO:0005515	Molecular Function	protein binding	Interproscan

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID	Source
-	-	-	-	-	-