Gene detail

Detailed information of gene18682.t1 in Actinoscyphia liui Gene info

Gene ID	Annotation	Chromosome	Start	End	Strand
gene18682.t1	MONOCARBOXYLATE TRANSPORTER	chr5	22421884	22437648	-

Gene Structure

More details in Jbrowse Sequence

CDS

gene18682.t1

ATGAAAGAAGAAGAAATGGAGCAGGAAAGTGAGATAAAATCAGATGACGTTCTCGCCATGGACACTAAAGTCTCCTGGTTTGTTTGCATGTGTTCTTCGTTGGCCAACGTGATTATCATTGGATCATTGTACAGTTATGGCATCATATTTCCCAAGATACTGGAAGAATTTCAAGAAGGAAAAGCGAAAACAGCAATGGTAGCGTCGATCAGCATGGGCCTTTACACATTTTCGTGCCCTGTAGCAGCAAAACTGTCTGTGCGCTATGGATGCCGGGCAGTAATGGTTGCAAGTGGACCGACATGCGCACTAGGTTTTCTGGGATCGTCATTCGCCCCAAACCTCTACGTTCTCTACTTCTCGTACGGTATTCTAATAGGATTTGGAAGTGCTATGGTCTACATGGCAGCTTGGGGGATCATTCCATTGTACTTTGATAAGAGTCGACATGTGGCCACGGGTACCTTGTCTTTGGGTATTGGGGCTGGCGTTCTTGTGATGACGGCTGTCACACAAGCTATTTTGGAGCAGTTTGATTGGAGGAAAACATTGCTGGTGTTGGCTGCTATCAATTTGCTGCCCAGTATTCTGGGCTGCAGTATTGCGAGAAAGAAGATTTCAACAGCGGTTGAAGAAGGCATGTCATCAAGACTAAGAGAAAACTCTGATAATGGATGCTGTCGCTGTCTAAGAGTGTTGGACGTGTCAATATTCAGAGATCCTTTTTTTATGATTATCTCAATTGCAGTAGCGATAGCTGTCGCAGGGAATATGATTCCCTACGTTCATTTGGCAAAATACGCAGCAGAAAATGGAATACCAAGTCATCTTTCCTCCTGGATGTACTTCACTATTGGCACCTGCTCACTACTTTCCAGACTTTTGACGGGAAAGTTGTGTGACACTGGTTGGATCCCTCACTTACGCATAAATCAACTCGCGGTGGTGATATATGCGGTTGGTGACTTCATGGTTCCCTTGGCAACCACCTTTACTTCTCTTATGATGTATTCTGTATTGGTAGGGGTCTGTGACGGTCTCTTTGCAACATCAGCGCTTTGTATCTTTGTCAGTTCATTTTCTGGTACTGGATTAGGATGGGCATTCTTTTTCCAAGGATTTAGTCTCTTTTTAAGTCCTGTGCTGGCTGACCCATCTAAATCCCGCATTGTACCCGTACATAAACATATTGTTAATGGCAACAATACCGAGGCTAACGAGTGGCCGTGGCAAGTGTCTCTCAGTCATGTTGATCGTGGTCGTTACAAATGTAGAGGATCCATAATCGCTGCTCAATGGATCTTAACATCGGCCATTTGCGTTAAAGGCGTTTACGCCAGGGAATTGGTTGTAGCTGTTGGTCTCCATAAATTGACGAATCAGACGAGTGTGGAAAAACTTTACAAAGTCAAGGAAATCTTTCTTCATGAGGACATTCGTCGTGGTCACATAAGAGCGGACGTAGCTCTTCTACAGCTAGAGACGAACATTACAATGGAAAAGCAAATACAGGCCATACAACTCCCTAAACAAGACGATAAGGTTGCTGTTGGGACGAAGTGCTACGTCACAGGATGGGGGAGAAAAACTCGCAGAGGAAAATATTCCAAACTTCTCCAAGAAACACTGCTAACCATCGCTGATGCTCGAAATTGCACCAAACAGAATAATCGCAAATTTGAAGAAAGTACAATGATTTGTGCTGGAGCACAAGGCTCGAGTAGTTGCCATGGTGAACATCGTCACGGTGACAATGGCGGACCTTTAACATGCCTAGAGGGGGATCAATGGATTATTCGTGGAGTAACCATTAAGGCCCATCATAGATGTGACCCACTTCGTTATACCGTGTTTGCTCGGGTCAGCAGTGTTGTGAGTTGGATCAAGATGACACAAATAAAAGATCTTTGTAAAGACGTCAGTTCTAAATGCTCCAAACACAAACACAGATGTCATCGTTTCCCTGTCAACCGACTTTGTCCCGAGACTTGTGGCAGTGGATGTGAAGCTTTACAGTCTTGTGCGGATTTCAACGAGAAGAAGTGCGAAAAGAACAAGAGATTGTGCAGCATTTCTATTGTGGAATATGTTTGTGCTAAGACTTGTGGGACTTGCAAATAA

Transcript

gene18682.t1

Protein

Gene family

Gene family	Subfamily
-	-

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF00089	Trypsin	Trypsin	Domain	Interproscan
PF07690	MFS_1	Major Facilitator Superfamily	Family	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR001254	Domain	Serine proteases, trypsin domain	Interproscan
IPR001314	Family	Peptidase S1A, chymotrypsin family	Interproscan
IPR009003	Homologous_superfamily	Peptidase S1, PA clan	Interproscan
IPR011701	Family	Major facilitator superfamily	Interproscan
IPR036259	Homologous_superfamily	MFS transporter superfamily	Interproscan
IPR043504	Homologous_superfamily	Peptidase S1, PA clan, chymotrypsin-like fold	Interproscan
IPR050327	Family	Proton-linked Monocarboxylate Transporter	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR11360	MONOCARBOXYLATE TRANSPORTER	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0004252	Molecular Function	serine-type endopeptidase activity	Interproscan
GO:0006508	Biological Process	proteolysis	Interproscan
GO:0008028	Molecular Function	monocarboxylic acid transmembrane transporter activity	Interproscan
GO:0016021	Cellular Component	membrane	Interproscan
GO:0022857	Molecular Function	transmembrane transporter activity	Interproscan
GO:0055085	Biological Process	transmembrane transport	Interproscan

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID	Source
-	-	-	-	-	-