Detailed information of gene14806.t1 in Actinoscyphia liui Gene info
Gene IDAnnotationChromosomeStartEndStrand
gene14806.t1ATP-DEPENDENT RNA AND DNA HELICASEchr42225831822274829-

Gene Structure
More details in Jbrowse Sequence
CDS
Transcript
Protein

Gene family
Gene familySubfamily
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Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00271Helicase_CHelicase conserved C-terminal domainDomainInterproscan
PF08148DSHCTDSHCT (NUC185) domainDomainInterproscan
PF13234MTR4_beta-barrelMtr4-like, beta-barrel domainDomainInterproscan
PF21408MTR4-like_stalkExosome RNA helicase MTR4-like, stalkDomainInterproscan

InterPro
InterPro termTypeDescriptionSource
IPR001650DomainHelicase, C-terminal domain-likeInterproscan
IPR012961DomainATP-dependent RNA helicase Ski2/MTR4, C-terminalInterproscan
IPR025696DomainExosome RNA helicase MTR4-like, beta-barrel domainInterproscan
IPR027417Homologous_superfamilyP-loop containing nucleoside triphosphate hydrolaseInterproscan
IPR048392DomainExosome RNA helicase MTR4-like, stalkInterproscan
IPR050699FamilyRNA/DNA HelicaseInterproscan

PANTHER
PANTHER termDescriptionSource
PTHR12131ATP-DEPENDENT RNA AND DNA HELICASEInterproscan

Gene Ontology
GO termsCategoryDescriptionSource
GO:0003724Molecular FunctionRNA helicase activityInterproscan
GO:0006401Biological ProcessRNA catabolic processInterproscan
GO:0055087Cellular ComponentSki complexInterproscan
GO:0070478Biological Processnuclear-transcribed mRNA catabolic process, 3'-5' exonucleolytic nonsense-mediated decayInterproscan

KEGG pathway
KOEnzymeEnzyme IDpathwaymapIDSource
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