Detailed information of gene12571.t2 in Actinoscyphia liui Gene info
Gene IDAnnotationChromosomeStartEndStrand
gene12571.t2EGF-LIKE-DOMAIN, MULTIPLE 7, 8chr35221377652227323+

Gene Structure
More details in Jbrowse Sequence
CDS
Transcript
Protein

Gene family
Gene familySubfamily
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Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00090TSP_1Thrombospondin type 1 domainDomainInterproscan
PF03146NtAAgrin NtA domainDomainInterproscan
PF12661hEGFHuman growth factor-like EGFDomainInterproscan
PF19030TSP1_ADAMTSThrombospondin type 1 domainDomainInterproscan

InterPro
InterPro termTypeDescriptionSource
IPR000742DomainEGF-like domainInterproscan
IPR000884RepeatThrombospondin type-1 (TSP1) repeatInterproscan
IPR004850DomainNtA (N-terminal agrin) domainInterproscan
IPR008993Homologous_superfamilyTissue inhibitor of metalloproteinases-like, OB-foldInterproscan
IPR013032Conserved_siteEGF-like, conserved siteInterproscan
IPR013320Homologous_superfamilyConcanavalin A-like lectin/glucanase domain superfamilyInterproscan
IPR036383Homologous_superfamilyThrombospondin type-1 (TSP1) repeat superfamilyInterproscan
IPR048287DomainThrombospondin-like, N-terminal domainInterproscan
IPR050969FamilyDevelopmental Signaling ModulatorsInterproscan

PANTHER
PANTHER termDescriptionSource
PTHR14949EGF-LIKE-DOMAIN, MULTIPLE 7, 8Interproscan

Gene Ontology
GO termsCategoryDescriptionSource
GO:0043113Biological Processreceptor clusteringInterproscan
GO:0043236Molecular Functionlaminin bindingInterproscan

KEGG pathway
KOEnzymeEnzyme IDpathwaymapIDSource
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TOP