| Gene ID | Annotation | Chromosome | Start | End | Strand |
|---|---|---|---|---|---|
| gene12497.t1 | SCAVENGER RECEPTOR CLASS F | chr3 | 51042435 | 51058914 | + |
| CDS | |||||
| gene12497.t1 | |||||
| Transcript |
| gene12497.t1 |
| Protein |
| gene12497.t1 |
| Gene family | Subfamily |
|---|---|
| - | - |
| Pfam accession | Pfam name | Description | Type | Source |
|---|---|---|---|---|
| PF00008 | EGF | EGF-like domain | Domain | Interproscan |
| PF00053 | Laminin_EGF | Laminin EGF domain | Domain | Interproscan |
| PF00090 | TSP_1 | Thrombospondin type 1 domain | Domain | Interproscan |
| InterPro term | Type | Description | Source |
|---|---|---|---|
| IPR000152 | PTM | EGF-type aspartate/asparagine hydroxylation site | Interproscan |
| IPR000742 | Domain | EGF-like domain | Interproscan |
| IPR000884 | Repeat | Thrombospondin type-1 (TSP1) repeat | Interproscan |
| IPR001881 | Domain | EGF-like calcium-binding domain | Interproscan |
| IPR002049 | Domain | Laminin-type EGF domain | Interproscan |
| IPR036383 | Homologous_superfamily | Thrombospondin type-1 (TSP1) repeat superfamily | Interproscan |
| IPR042635 | Family | MEGF10/SREC1/2-like | Interproscan |
| PANTHER term | Description | Source |
|---|---|---|
| PTHR24043 | SCAVENGER RECEPTOR CLASS F | Interproscan |
| GO terms | Category | Description | Source |
|---|---|---|---|
| GO:0005044 | Molecular Function | scavenger receptor activity | Interproscan |
| GO:0005509 | Molecular Function | calcium ion binding | Interproscan |
| KO | Enzyme | Enzyme ID | pathway | mapID | Source |
|---|---|---|---|---|---|
| - | - | - | - | - | - |
Maintained by Dr. Jiajie She in Longjun Wu's Lab & Pei-Yuan Qian's Lab and supported by Southern Marine Science and Engineering Guangdong Laboratory (Guangzhou) & The Hong Kong University of Science and Technology
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