Detailed information of gene06665.t1 in Actinoscyphia liui Gene info
Gene IDAnnotationChromosomeStartEndStrand
gene06665.t1CHROMODOMAIN-HELICASE-DNA-BINDING PROTEIN 1-LIKEchr23629664736320368+

Gene Structure
More details in Jbrowse Sequence
CDS
Transcript
Protein

Gene family
Gene familySubfamily
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Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00176SNF2-rel_domSNF2-related domainDomainInterproscan
PF00271Helicase_CHelicase conserved C-terminal domainDomainInterproscan
PF12770CHATCHAT domainDomainInterproscan
PF13181TPR_8Tetratricopeptide repeatRepeatInterproscan
PF13424TPR_12Tetratricopeptide repeatRepeatInterproscan

InterPro
InterPro termTypeDescriptionSource
IPR000330DomainSNF2, N-terminalInterproscan
IPR001650DomainHelicase, C-terminal domain-likeInterproscan
IPR011990Homologous_superfamilyTetratricopeptide-like helical domain superfamilyInterproscan
IPR014001DomainHelicase superfamily 1/2, ATP-binding domainInterproscan
IPR019734RepeatTetratricopeptide repeatInterproscan
IPR024983DomainCHAT domainInterproscan
IPR027417Homologous_superfamilyP-loop containing nucleoside triphosphate hydrolaseInterproscan
IPR031053FamilyChromodomain-helicase-DNA-binding protein 1-likeInterproscan
IPR038718Homologous_superfamilySNF2-like, N-terminal domain superfamilyInterproscan
IPR043472Homologous_superfamilyMacro domain-likeInterproscan
IPR049730DomainSNF2/RAD5-like, C-terminal helicase domainInterproscan

PANTHER
PANTHER termDescriptionSource
PTHR47157CHROMODOMAIN-HELICASE-DNA-BINDING PROTEIN 1-LIKEInterproscan

Gene Ontology
GO termsCategoryDescriptionSource
GO:0000166Molecular Functionnucleotide bindingInterproscan
GO:0003678Molecular FunctionDNA helicase activityInterproscan
GO:0005515Molecular Functionprotein bindingInterproscan
GO:0005524Molecular FunctionATP bindingInterproscan
GO:0005634Cellular ComponentnucleusInterproscan
GO:0006281Biological ProcessDNA repairInterproscan
GO:0006338Biological Processchromatin remodelingInterproscan
GO:0006974Biological ProcessDNA damage responseInterproscan
GO:0140658Molecular FunctionATP-dependent chromatin remodeler activityInterproscan

KEGG pathway
KOEnzymeEnzyme IDpathwaymapIDSource
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