| Gene ID | Annotation | Chromosome | Start | End | Strand |
|---|---|---|---|---|---|
| gene05992.t1 | FAT ATYPICAL CADHERIN-RELATED | chr2 | 29259037 | 29270162 | + |
| CDS | |||||
| gene05992.t1 | |||||
| Transcript |
| gene05992.t1 |
| Protein |
| gene05992.t1 |
| Gene family | Subfamily |
|---|---|
| - | - |
| Pfam accession | Pfam name | Description | Type | Source |
|---|---|---|---|---|
| PF00028 | Cadherin | Cadherin domain | Domain | Interproscan |
| PF01049 | CADH_Y-type_LIR | Cadherin, Y-type LIR-motif | Family | Interproscan |
| InterPro term | Type | Description | Source |
|---|---|---|---|
| IPR000233 | Domain | Cadherin, Y-type LIR-motif | Interproscan |
| IPR002126 | Domain | Cadherin-like | Interproscan |
| IPR015919 | Homologous_superfamily | Cadherin-like superfamily | Interproscan |
| IPR020894 | Conserved_site | Cadherin conserved site | Interproscan |
| IPR027397 | Homologous_superfamily | Catenin binding domain superfamily | Interproscan |
| PANTHER term | Description | Source |
|---|---|---|
| PTHR24026 | FAT ATYPICAL CADHERIN-RELATED | Interproscan |
| GO terms | Category | Description | Source |
|---|---|---|---|
| GO:0005509 | Molecular Function | calcium ion binding | Interproscan |
| GO:0005886 | Cellular Component | plasma membrane | Interproscan |
| GO:0007155 | Biological Process | cell adhesion | Interproscan |
| GO:0007156 | Biological Process | homophilic cell adhesion via plasma membrane adhesion molecules | Interproscan |
| GO:0016020 | Cellular Component | membrane | Interproscan |
| KO | Enzyme | Enzyme ID | pathway | mapID | Source |
|---|---|---|---|---|---|
| - | - | - | - | - | - |
Maintained by Dr. Jiajie She in Longjun Wu's Lab & Pei-yuan Qian's Lab and supported by Southern Marine Science and Engineering Guangdong Laboratory (Guangzhou) & The Hong Kong University of Science and Technology
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