Gene detail

Detailed information of ctg993-1.0-1 in Gigantopelta aegis Gene info

Gene ID	Annotation	Chromosome	Start	End	Strand
ctg993-1.0-1	CYCLIC NUCLEOTIDE PHOSPHODIESTERASE	chr10	32833473	32926656	+

Gene Structure

More details in Jbrowse Sequence

CDS

ctg993-1.0-1

ATGTCCGACGAAAAAACAACGGCTGCTTTCCTTCGGAATAATCCGGAATTTCTTAACAACTGGCTGTCGAAACACGGGACGGCCGAACATCTGCAGCATGTGGCGAAGAGACTCGAAGACAATGATGCGACGGAAAAGTCCGACATTACCCTGGCTCTGCCTTCGTTTTCTCAGGTGGCCAGAAATTCCATTACGAGTTCGATCTTCAAGAAATACCTAATAGGGGATCGGAATCGGAAAACGTCGGTGCGAAAGGACAGGTCTTCGCTATGTCATATGTCGGAGGAGGAGTTGTTCATGGAACTTATCCGCGACATCGCCAGCGAACTGGACGTCAACGTCCTGTGTCACAAGATCCTGCAAAACGTCAGCATACTGACGAACAGTGACAGGGGCAGTCTGTTCCTGGTGAGGGGGACGCGGGACAGCCGCTACCTGGTGTCCAAGCTCTTCGACGTGACGAACATTTCCACTCTGGAAGAGTCCATTCACACGGAAGAAAACGAGATCAAGGTGCCTTTCGGGAAGGGTATAGCAGGTCACGTGGCTCAGACCAAAGAGATCATCAACATAAACAATGCTTATGAGGACCCCAGATTTAACCAAGAGGTTGACAAAAGAACCGGATACAAGACCCACGCCATTTTATGCATGCCCATCATTAATTACGAAGGGGAGGTTTTTGGAAAATATTTGACGTTCTGTGGAATAGGAATTACAAACGCCCAACTGTTTGAGATGTCCGTCAATGAATTCAAGCGGAACCAACTTTTGCTTCACTTGGCGCGTGGTATTTTCTCCGAGCAGACGAACCTGGAGAAGTTGGTGGAGAAGGTAATGCTGGACGCCCAGGATCTTCTCAAGTGCGAACGGTGCAGCGTCTATCTTCTGGAGAACTCGTTTGAAAACGATATGACTTTTTCCATGGCATTTTACCTAGACGCTAAAGACAAAGAAAAGATTAAAACGCCTGGCAAACAGGAATTGTCCGAGTCTAGGACGGCCCAAATAGCCCAGTTCGTAGTGGCGAACGGCAAGTCGGTGAATATTTCCGATTTGGAGCTTGACGGCCGATTTGGAGAAGGACCGTTCGTAGAGGCCGATGGATTCCACACTAGGAGCATACTGTGTATGCCCATCTTCAACAGCGACACTAAAATCATCGGAGTCACGTGCCTGATGAACAAAGAAAACGGAACCCCCTTCAATGAAAATGACGAGGGAATTATTGAGGCGTTTTCCATATTCACTGGGCTTGGAATCCACAACTGTCAGATGTACGAGAATGCTTGCCGTCTGATGGCCAAGCAGACGGTAGCGCTCGAGATCCTCTCCTATCACGCGACTGCGCAGAAAGAGGAAACGGAAAAACTACTGAAGAGCACGATCCCGTCGGCGGAACAGTTGCACCTGTACTCGTTCGACTTCAACGACATGCACCTGGACGACTACGGCACGCTGAAAGCCGTCATCAGGATGTTCCAGGAGGCCAACATCATCTCCACGTTCAAAGTACCGTACGAGGTTGTTTGCCGGTGGGCGTGCAGCGTTAAGAAGAACTACAGACCTGTGACGTATCACAACTGGAGGCACGCCTTCAACGTGTGTCAAACCATGTTCACTATGCTCTACACTGGAGAGATGAGTCCGCGATTCGACATTCTGGACATGTTTGCACTGATGGTAGCCTGTCTGTGTCACGACCTGGATCATCGGGGTACAAACAACGCGTTTCAAGTGACAGTTGCCTCCCCATTGGCGATGTTATACAGTACATCCGTGTTGGAACATCACCACTTTGATCACTGCATCATGATTTTAAACAGTGAGGGAAACAATATTTTCCAGGGGAAAAGGGGCGAATTCCAGTCTTTGGTAGAACAGGGAGAGCGAAAGTTTGAAGATGATGAAAAGAAGGATTTATTGAAGGGCATGATGATGACTGCCTGTGACGTGGCAGCGATCACGAAACCGTGGGAGATCCAGCAGGAGATCGCACAGCTGGTCGCGGGAGAGTTCTTCGAGCAGGGCGACATCGAGAAAACACAGCTGGGGAAAAAACCTTTACCGATGATGGACAGAGATAAAAAGGACGAACTACCTAAAATGCAAGTTGGCTTTATTGACGCGATTTGTTTACCCGTCTACAAGCTTTTTGATTCCAGTATGGAATTGGAGTTCGTACCATGCTGGGTTTTATGTTAA

Transcript

ctg993-1.0-1

Protein

Gene family

Gene family	Subfamily
-	-

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF00233	PDEase_I	3'5'-cyclic nucleotide phosphodiesterase	Domain	Interproscan
PF01590	GAF	GAF domain	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR002073	Domain	3'5'-cyclic nucleotide phosphodiesterase, catalytic domain	Interproscan
IPR003018	Domain	GAF domain	Interproscan
IPR003607	Domain	HD/PDEase domain	Interproscan
IPR023088	Family	3'5'-cyclic nucleotide phosphodiesterase	Interproscan
IPR023174	Conserved_site	3'5'-cyclic nucleotide phosphodiesterase, conserved site	Interproscan
IPR029016	Homologous_superfamily	GAF-like domain superfamily	Interproscan
IPR036971	Homologous_superfamily	3'5'-cyclic nucleotide phosphodiesterase, catalytic domain superfamily	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR11347	CYCLIC NUCLEOTIDE PHOSPHODIESTERASE	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0004114	Molecular Function	3',5'-cyclic-nucleotide phosphodiesterase activity	Interproscan
GO:0005515	Molecular Function	protein binding	Interproscan
GO:0007165	Biological Process	signal transduction	Interproscan
GO:0008081	Molecular Function	phosphoric diester hydrolase activity	Interproscan

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID	Source
-	-	-	-	-	-

Expression pattern

1. Expression trend for ctg993-1.0-1 global RNA-seq network