Gene detail

Detailed information of ctg96-8.27-1 in Gigantopelta aegis Gene info

Gene ID	Annotation	Chromosome	Start	End	Strand
ctg96-8.27-1	DNA REPAIR PROTEIN RAD9	chr3	38963382	38978570	-

Gene Structure

More details in Jbrowse Sequence

CDS

ctg96-8.27-1

ATGGGGGAAAAGCCAAAACTGGCAAAAGTGGGAGTAGTTCACCAAGTTTTTGGTCGAGCCATTCACTCTTTCTCCAGGATAGGAGAGGAGCTGTACATAGAACCATTAGAACAAGGGTTGGCTTTGAGAACTGTTAATTCATCACGTTCAGCATTTGCTTGTTGTATTTTTGCGCCGTCTTTTTTTCAACATTACAATGATGGCTCGGGGAAGATTAACACACAGGAAAGTGAAGAGGAAGGCTTCAGGTGTATTGTGAAGACACACAACCTGGCATTTATAGAGTGCGAAACACTGGAAGCTGTCTTCTCTAAGGATATGTCTCCAAATCTCCTAACAGCTCCACCAAAACTGTTGTGTGATGTCGTGGTGAACTTTCAGAACAACCAAGAGGAGATAACTCTAATAGTGAAGCCAGACAAGATATCATTGAAAAACTATGTAGAAGACGAACCAGATCCCACTAAAGTTGTTCACACTGAAATGACTCTTGTTCCAGAGGAATTTGACAATTACAGAGTTGGAGTAGACACTGATATTACATTCTGTTTAAAAGAGTTGAGAGCCATTCTTGCTTTTGCAGAAACAACCAACCTTCCTTTAAGTATGCACTTTGAAACTGCTGGAAGGCCCATAGTGTTCAGCATAGATAGTGATGCGACATTTGAAGCTAACTTTGTGTTGGCTACGTTAGCCGATCTTGACTCACAGTCATCGTCTCAACAGCCAGTGCAAGATAAAGTAAAAAAATCTAGTAAAAACAAAGGGGAAGACAGGCAAGTCATGCTGTCAACATGCAAAAGAGTAAAACCAATAATAAACTCCGGACTGACTTCTACCCAAGATGGACAGAATGGATACCGCAATTCCTCTCAGCAGAAAAGACAGACTGTAAAATGTAATGACGGACATCCTGCTGAAACTGGGCATTTAGAGACAAGAGGAGACAACCCTGCCTATGATGAAATGTTGGATGAAGACATGAATATTGATGAGCAGACCATGATGCATCTGAACGCAGTAGAGGCAGAAAGTGAGATGGTTAGAGGCGATGGCCATCAGTCACCACCAGCGTCCAGGTCTTCATCCGACTCTGCTCTCAGCCAAGTGATACCACTACAAAGTACAAACATAGCGGTCAGTTCAAATGCAAATAAATGTGACTTGGAAAGTTCAGTGGCAGCTGATGAATCGGTGATGCAGGATGTACACGAGGAAGAGGAGTTGGTTCCTGGTACTCCTCCCAGTAAAAAGTTCCGTTCCATGTTTTTTGGACTTTCACAGAGCAGTACTCAAATGTCGCAAGTCTCGCAGAAACCAAAAACTGTTGTATTGGCTGAAGATACGGATGACGATGATTGACTTGGTTTCAGGAGAAAACCCCAGAAAAAGACTTAACAATAACTCAAAGAGCTACACGGAGTTACAGATTGTCTAGTCCAAGTGAATTAGTGTTGGAAACCCAAGCCTTTAACATACATGATCTAAAAGGTTCTTGTCAACCTTATCATGAAACACTTTTACAAATTAACAGATGTTATTCATTTGACCAGATTACCAAATCAGTGACAGTCAACACAATTTTACATCCAAAATGTCCCCAGTTAGGGGTTTTTTCATACATGTTTTTAAAAAATGTGTAAATGGTACGGTATGATCAGCTTTGGGTATCTTGAAATATTTTAAGATACCACATGAAAAGCCTCAAAATCATGTAAACAGTGTTCGAAATAAGCACTTGTTCGTTTGTTCTAACAAGAGAAAATCTGCTCGGATAAGCAAAATATACCTTGATGGTTGTCCAGTGGACAAGTGAAAATGTTCAAAGCAGTTTTATTTTGAGCAATGAAAAACAAAGTCCTTGTACCTGAATAAAACAAACCACTTATTTGGATATGTGAAAATATTGGTAGACAGGTAGATTTTTAGTGAACATTTCTGCTTATTTGTATCACTGGTAAATAAAAAGAATTTACATGTAGCCTAGCATTTCATATTAATTATTTACCACAAATGACATTAAATTTTAAAATTAGTTTTTTGAGCTATAAAAGACTATTGTTTGACTATATTTTATTGTTTAAGAGTAAAGTAATAAATTGTTTTTTTAATTCAATCATAATTGTTTACTGGTAAATCAAAGGTCTATTAGTGCCATCATGTCTGGGGAAGTACAAACAAAAGACTCCTTGTTGTTTATCTGATGTTATTTTTATATCATGCACATTTTATGTATCATGTACATAAACATGTGAAAGCAGTAATCATTATACATAGCATCTCATTTGAGTATTATTTTTTATAACTGGTGCATGTTTGTCATACTTTTTGAATAAATTATTTTTATTTACATTGTTATATTTTTATCGGCTCCATGAAATGGATGATTAACGTGACAACAAATTGAGCAGATACAATGGAATCACATTTGGTGTGATGGTGCACTGTAGAAAGCTGATATTAGCATTATCAAGTACAGTAGCCTACTTTTCAGCCATGACGGAGCACAAAAAGAAATATTCTACAATATGAAATCAACACTAATGACGCAGTGGTTAATCTGGTGGCTTTAAAGCTGGTAATGCTAGATTTGCATCCCAGTACAGGCTACAACTGGAAGAATGTGCAGCTTTGTGGGGACCTCTTGCCAGTCTTTCTCAATAATGATTACTGTAAACAGGGGAGGGTGGAATGCACATTTAAATTTTGTGTCATTAACA

Transcript

ctg96-8.27-1

Protein

Gene family

Gene family	Subfamily
-	-

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF04139	Rad9	Rad9	Family	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR007268	Family	Rad9/Ddc1	Interproscan
IPR046938	Homologous_superfamily	DNA clamp superfamily	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR15237	DNA REPAIR PROTEIN RAD9	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0000076	Biological Process	DNA replication checkpoint signaling	Interproscan
GO:0000077	Biological Process	DNA damage checkpoint signaling	Interproscan
GO:0006281	Biological Process	DNA repair	Interproscan
GO:0030896	Cellular Component	checkpoint clamp complex	Interproscan
GO:0031573	Biological Process	mitotic intra-S DNA damage checkpoint signaling	Interproscan
GO:0071479	Biological Process	cellular response to ionizing radiation	Interproscan

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID	Source
-	-	-	-	-	-

Expression pattern

1. Expression trend for ctg96-8.27-1 global RNA-seq network