Gene detail

Detailed information of ctg943-1.17-1 in Gigantopelta aegis Gene info

Gene ID	Annotation	Chromosome	Start	End	Strand
ctg943-1.17-1	PROLIFERATING CELL NUCLEAR ANTIGEN	chr8	22909585	22922695	-

Gene Structure

More details in Jbrowse Sequence

CDS

ctg943-1.17-1

TTGATTGAAAATATATATATATATATATATTTTTTAATTATGAAATAAAAAACTCTACTTATTTAAAATATATTTTATTACGATTTTTGGCTCGTTTCTGTTGCAACCTATTTTATGATCGCACAAACGACATCATTCTCGCAGATCTAAAAATAAAACATCCAATGAAAATGTCTGTATCTGACAATTTGGCGCCATTGTGAAATTTGGCGCGAGATTGACATTTCAGGAAGAGAAAGGATAAAGACATTAGTTTATTTCATAGCTACATGAAATCCGTGTTAATCTGCTCGAAAGAAAACATAACAGTCACTGTTAACTCACCGTCTTGTACATGACAGTATTGTTTTTAATTAATTACTTGTATTTTATTTTATAATCTTAATTGCAACAATGTTTGAAGCAAGACTTGTTCAAGGATCTCTGTTGAAGAAGGTTTTGGAGGCGATCAAAGAACTTCTAAATGAGGCGATATTCGATTGTCAATCCACAGGAATGACGTTGCAAGCTATGGACAGTTCTCACGTCAGTTTAGTCTCATTGAATTTGAGGAGTGATGGTTTCGACACTTACAGATGTGACAGAAATCTGTCTATGGGTATTAATCTTGTGAGCATGTCAAAAATTTTGAAGTGTGCTGGAAACGATGATGTCATCACTATCAAAGCAGATGACACTGCTGACACGGTGACATTTGTTTTTGAAGCACCAAATCAGGAAAAAGTGTCCGACTATGCCATGAAATTGGTAGACTTGGATACCGAACATTTGGGCATACCTGATACAGAATACAGTTGTGTGGTTAAAATGCCTTCTGGTGAATTTCAAAGGATATGCAGGGATTTGAGTCAAATTGGAGATTCAGTGGTTATTGCTTGCACAAAGGAAGGTGTAAAGTTTTCTGCGAGTGGGGATTTAGGAACAGGTAACATCAAGCTGGCCCAGAAGGCCGATGCTGACAAAGAAGATGAAGCTGTGACCATCGACATGAACCAGGCCGTGTGTCTGACGTTTGCTCTGCGATATCTCAACTTCTTCACCAAGGCGACGCCGCTCTCTGGACAAGTGACACTGTCCATGTCACAAGACGGGACAATATTTCGAAATCTGAGGAAACCGGAAGTCGGTTCACACCTAGTTGTTGAGTACAAAATTGGAGAACTCGGATTCTTGAGATATTACCTTGCTCCTAAGCTGGAAGATCAGGAAGAATCATGAACAGTGTTATAGATTTATACATACATGTATATGTCAATTTTTAACCTTAGGACCATGAGATAAACTTCGGAAGCTACTTCTCCTGGTAGTGTTAATAATGCTGCACTTGAAATTCTGAAAGAACACACAATTGTGCATGAAGGACTCTATATATATCTAATCTCAGTTTAATAGGTTGGTATTGAGAACAAATATTCATTAAAAAAATTCAAGTGCTCTGACGATTAAAGATAACAAAATATCAACAGTGGTCTAATTTTTCCATAGTTTACAACACAAGCATCATTAACATATATCACTGATATATGAAATGATATGACCAAATTTCATATTTGATCGACTGCAGCCTTGGTTAATATACCTTCATTCTTATGGGTTTCTGTTTAAATTGACCAAAATATTCCATTTTAATAAAATTGTGTATTTTATTATCAGCTAAATTGTCAGTAATATTGCTGGCTATAGCTGAATAATTCTTAGAACACTATTTGAACAGATGTTTTAAAAACGAAATGTGAATAAATGGAATTTGGCCTACAGTAGGTTTAATTTGCATTAAACCTCCTGTTTGTAGTCTGTTTATACTGTGTCATTGCATCCAGAGTTTGATCATTACATAAATTTAACCAATATCCCATGCTGTTGCTAGGCATCTAAAATGTGGTAAACCTGAACGACAAAACCATAATACATTATCAAGGCCATATCTGCACAATGCAGAGTTGAATGGGCATTTGGCAAATCTGCAAAACAAACTCGCAACTCCCCCTCCCAAAAACAACTGATTAATCTTTTTTTTTAAACCTTATAATCTGGTATTCCACAGATTAGACTGGATTGGAAAGTGGTAAAGTGTAGTGACAGAATGTAATACTTTTTGTTAAATACAACACAAGACTTAAAACTAATCGCGTCAGTAGTTTGGAGGTTGGGGGTCCTCATTCTTCAGAAATATTGCTCATTTTATTATAACCTAGTGCAACTGTGAAATTGTCATTTGATTAAAATATTGTAGACCATAATATTTTTAATGCAATATGTTTACCAACTTGTTTACAACTTGATGTCTGACTGGAACTGTATTAATAAACAGATGTTAAATGCTGGTATTCTGTTTTATTTAAACAAAGGAGTTGCTTGGAGTTAACAATGACTTGAAATATATGTGGGGATGTGGGAGAGATGGCAGAGTTTTAAAAAGTGGAAGGATGTGAACTTTACATGGTATTAAAATGGAGGAAAATTCTAATTACTTATATCGGATTCCTTTTCATTATTTATGAGTTGGTATAATATGTCAGTCTGGTTATTTGAATCTGTTGAAGGTATTGTAACGAA

Transcript

ctg943-1.17-1

Protein

Gene family

Gene family	Subfamily
-	-

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF00705	PCNA_N	Proliferating cell nuclear antigen, N-terminal domain	Domain	Interproscan
PF02747	PCNA_C	Proliferating cell nuclear antigen, C-terminal domain	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR000730	Family	Proliferating cell nuclear antigen, PCNA	Interproscan
IPR022648	Domain	Proliferating cell nuclear antigen, PCNA, N-terminal	Interproscan
IPR022649	Domain	Proliferating cell nuclear antigen, PCNA, C-terminal	Interproscan
IPR022659	Conserved_site	Proliferating cell nuclear antigen, PCNA, conserved site	Interproscan
IPR046938	Homologous_superfamily	DNA clamp superfamily	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR11352	PROLIFERATING CELL NUCLEAR ANTIGEN	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0003677	Molecular Function	DNA binding	Interproscan
GO:0006272	Biological Process	leading strand elongation	Interproscan
GO:0006275	Biological Process	regulation of DNA replication	Interproscan
GO:0006298	Biological Process	mismatch repair	Interproscan
GO:0019985	Biological Process	translesion synthesis	Interproscan
GO:0030337	Molecular Function	DNA polymerase processivity factor activity	Interproscan
GO:0043626	Cellular Component	PCNA complex	Interproscan

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID	Source
-	-	-	-	-	-

Expression pattern

1. Expression trend for ctg943-1.17-1 global RNA-seq network