Gene detail

Detailed information of ctg903-1.6-1 in Gigantopelta aegis Gene info

Gene ID	Annotation	Chromosome	Start	End	Strand
ctg903-1.6-1	LITTLE ELONGATION COMPLEX SUBUNIT 2	chr9	70282461	70307167	-

Gene Structure

More details in Jbrowse Sequence

CDS

ctg903-1.6-1

ATGACAAAGCCATACAAATTGTATGTGTGTGATGTCATTAGAGATTGGATTTGGACTCTTAAATGTTTTATAAGTACGGGGCCCAGGACTGCAGGACACTTGGAGCTCGAAGATGGGGCAAGATCAATAATGGAGCCAGTAAATGGAAAGGAATATTTCTTTACAGAAGAAAGTTTTCTTCGTGTTGCTGGCCCCAACAGTTTTGAGGATTGGCTTCGTGCCTGTTTATCGGAACGAGGCTACACATGTGACATAGCCGCAGGTCCACTACAAAGAGGTCAGCATGAACAAAGAAAGGAAAGGGAAACACCAAGCCGAGGATATGATAAAAAGGACCGACCGTCACATGCCCCTGATAAGATATCTAAACTGAAATGCCTTCAAAAGCCTTCGTCTTTAACCCATGGTCAACAGAAGCGATATCTGGATCTTTTTCAGAAGTATATTCTGACTGTTTTTCAAAAACAGCCCACACCAGCAGATATAAAGGAACTCACAGAGCTTGAATCATTACAGGTTAAAGTGTCAGCTGAACAGAGTGAATTTTTAAAATGTTTGGAATCCATCTCCAAATCTTCAAAAGCAGAGTATAACATTTTACTGCCAGATGCTAAAAGATATATTGAGGAAAAGATACAGAATCAGCGTAATATGGTGAACCAGTACCCGAAGCACTACTCAACATTAGATGTAATTCCAATAGAGATGAAGGCAGCCTCTGAACATGTGTTTGACTTAGTGTTTCAAAAGACTGTCCTGCAATTGGGTCCAGATCCGAAAGTGTTTCTACCAGACATAAAAGCATCCACCAAGCCAGTTATACCGACCAGTTACGAGAAAATAGTGAAGCGATTCCCTCCCCCGCATCCCAAGAAAGATGAGCATATCTGGAACCATGAGCCCTGTAGTAAGGACACGAATGCTGAAATCTTGGCCGACAAATATGTTTGTGATGTTGTGTTGAGTTCCAGTGTTCTCCAGTCTGGTGATTCAGATTCACAACAGATGGTAGTCTATCTTGACAAACCTCTTTGTCCAAAGGTGCTTTCGAACAGGCAGAAGAATACCCTTTATCATAAATATGCTCTGAAGGCCTACATCACTCATCCTGCACAGAACAAGGGTGTGAAAGCTTCAAGAGGCAGTCTGAGTGGCAGGGATGACGTTAAACTGACACCAGTTAGTTCTCGTCCTAGGACTGGATCCATTGATCACAGCCAAGAGGCAGACAATTTGTTTGAAACTGAAACTACCATTGATGATCTTGAAACGTTTGGTTCTTTTGATAAAATGCCTGTTAGAAAACATAAAGCCTTCACAGCAGATGTTTCAAGTGTGACTATCACTTCTAAACCAACACCATTGCCTGCTGTTAGTTCAGGAAATAATACTTGTGGGAATCTGTCTCGACAGAATAGTGATGTTCCCAATTTGGCTGATTTTAAGTCAGAAAAGAATTCAGATTCAGTTTGCCTGACAGACACTGGTGCAACAGGCAAACCATCTTCAAATAAGGTTGGTGTAGCAGATGCATATACTGATGTTAAAGTGAAGAATTGCAAGGAGAGGTTGAAGGCAGACCATTGTAGATCTGATACTGATTCTGATGAAGAAAATATGCTTGTTATTGACTGCAATGAATCTGAGGGAGACAGAAAAGCTTTAAAACATTCCATCACAGCCACAGGCAGCATGATACATTCTGCTACAACTGCAGCTTCAGATGTGTTATTGGTTCCAGATATTCAGAAGGAAAGTCACAGTAAAGGTTTTGCTGAGGAACATCAAGTTTCGCCAATGTCTCCTGATAAAAGCATTGACATATTTCCCCAAAATAAAATGTCCAGGACAAAATCTGATTCTGTTAAAGATGGTGCTGTGATTGATAATGTTTGTAATTTAAAATCTTCAGAAAGTGACAGTCAGTCTACAATCTTAGCGTCCATGCAGTTGAAGGAAACTGTCTTACAGAAAAAGAAATTGGTTATTGTTGTTCCACGATGTGACCAAAACTCGCCCATATCTCCTGAGAGTAAAGGTGAAACATCTTGCATTGGAGGTAATTCAGTGGATGGACACAGTGTTGTTGAGTCACCATTGTCTCCAGATGACAGCACTAAGACACCTCCCAAAATGTTTCATCATCCAAAGTCATTTGAAAGTGAGTCCGATTCCCATGACGACAGTTTGGTGATTGACATGCCAGCTGAAAGTGAGAGAGAGTATTCTCAAGTCTTTCTAAGTCCAAGAGCATTACGGGCTAGAAAGAGATATAACTCAAGTGATACATGTAGCCTGTCACAACCACAAACAGAAATGTCAGAACAAGTGCAGTCATTGTCACATGATTCTGAACCGGTTCAGATTTCTGAGGAATCTCGCATTGATCAGTCAGCTTCTGAGAAAACTGAGGACAAATTGATCAGCATTGATACACACAATGCAGATATTTCTTCCTTGGACAAAACCAAATCTGCATACGTTGATGGTGATGCCACTGGTGTTAAACGAAAAAGAGGTAGGCCCAGAAAAGAGAAAGCAGAAGAAGTGTGCAAGAAGTTCAAATCGGCAACAAATTCAGATTTACCAGAAACCTTCACAGTTAAAGAGGGAAATCCAGGTTCTGGAACGATAAAATCCACAAGCAATGAACACAGGAGAAAAACGTTGTCTAAACCTGCAGGATCCAGCACTCTAGAGTCAATCCTACAGCTTCAAAACCAGATGCTTCCTTCTACTCCTGGCCACCACAACAAGCTCATTGAAGGAGATAACAACACAGATGTGTATAAACAGCCAGAACACAAGAAAATCTCGTACAATTTGTGGGATTTCAGTGGTCTTAGAGTACTGACCAGGGCATCCAGTCACGGCACACTGAGGGAATACCCAAACAAGCTGTATCCGGTGTCAATCGTGCCGAAGCTGGAGTACCAGGCTAAGTTTGGGGTGGAGCAGATCACACAGAGTGAGATGTCTCGTGACTGGGTGTCCTGCCTCATCAAGCCAAACACGCACCTCATCAGAGGTCGAATCAATGCACAAACCTCTGAAATTATTATGCTGGAAGATTTGGACATATCAAAAGTGCTTCAACCTTCCATTCCCTTCAATCCCCAAGAGTTTTTATGCTTTCTGCATGGTCTCTTTTTGCATCTAAAACGACTGCCTGTTGGAAATTACCTGTTGACTCATTCAAAAGGGGAAAGCTACATTAACATCTTAAACAGCATTGATGCACACAACAGGGGATCATATGACCTGCATTTCGACCACAAAGTTTTTATATCAAGTGACAGCCCTAAGGCCGCAGTTCCCTGGATTCCTATTGACCCCACAGTGATTCTGCCTTTCCACAAAAAACATGGGCGGGTACCAGCCACGTTTGAACCCAAAGATTTCAGAAAAATTCAGAAAAAAAATAAAGGCAAAGGGAAGAAGAAGTAGCCAAATAACATGACCATAACCGTAGAAACAGATGTTGTGATACCAAGCATTGTCTTTCTTAATCAGAGGAGTAGTTTCTGTGATGATCATCAATACCATGAAGTGTAAAATTCATCACTTTATTATACTGACTTAGTATTGTAAGTGACGGTCAGCAGAACAATTGGCATCAACAGTGCTGGTCAGAACTGAAGTGTCTCGCTGATTCTTAAGACCAAATATTGAAATAACAATATGTTACTGTTAGATATGATAGTGTTTTCCCTAGCTTGATTTAGCCTGGTGTTGCACCATGTCTGAATAGTCTAGCACCATCTTGCCATAATCAGAGCCACAAGTCTGTGTCAATAATTAATTCTGAAATTGCCTTTATTAAACACTCAGAAAATGTATTATTAATTAATAAAATATCCCTGTTATATATTTTGCTATTCATTTATTAAAGCAAGCACATTAATTACAATTATTTTTATTTCAATTAATTTTTTGTCTTTAATGAAAAAAAAGTTACCAAAAATGAGTGAAAATGCCCCAAAAGTCTACCATGTCTTGCCAAATGTCCAGGTAAACCACTATACCATATAACCATAGCTAAAGTGTTCTTAGTACATGTATGGCGTTACACCTTCAGTAAACCCAAATAAACCGATTTTAACAACATCTGTGTCCATGGAAAAAGTATCACAAGTATGCACATGCTGGTGTGGATGTGCTGCACTTGTGTATATGGATAAAGACATGCATACACCATTTAAAAAACAGAAAAGCTTGAAGTGGCTTTAAACAAAAATAACCTGTAAAAGGATTGAAAATTGTCACTCAAAACCCTGCCATTTTGTTCTTCAGATGCT

Transcript

ctg903-1.6-1

Protein

Gene family

Gene family	Subfamily
-	-

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF10505	NARG2_C	NMDA receptor-regulated gene protein 2 C-terminus	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR019535	Domain	Little elongation complex subunit 2 , C-terminal	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR14633	LITTLE ELONGATION COMPLEX SUBUNIT 2	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0008023	Cellular Component	transcription elongation factor complex	Interproscan
GO:0042795	Biological Process	snRNA transcription by RNA polymerase II	Interproscan
GO:0042796	Biological Process	snRNA transcription by RNA polymerase III	Interproscan
GO:0045945	Biological Process	positive regulation of transcription by RNA polymerase III	Interproscan

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID	Source
-	-	-	-	-	-

Expression pattern

1. Expression trend for ctg903-1.6-1 global RNA-seq network