Gene detail

Detailed information of ctg9-10.7-1 in Gigantopelta aegis Gene info

Gene ID	Annotation	Chromosome	Start	End	Strand
ctg9-10.7-1	N-LINKED OLIGOSACCHARIDE PROCESSING	chr6	77127122	77157254	-

Gene Structure

More details in Jbrowse Sequence

CDS

ctg9-10.7-1

ATGCCCCTATGTAAAACGAACCTGCACTACTTTCTTGTGGTGACGAAAAGCAAAGTGTGTGCCCATGTAACACGTTGGTACTGGTTAACAACATAAGCGTCTTCATACCAGCCAAATGCTGAACAAAGTTTTACCTGTTTGTCGACACCTGATGGGTCTGTTGTATCGATACCTTTTATATACGTGAATGATGATTACTGCGACTGTGAGGATGGATCTGATGAACCAGGTACAGCAGCATGTGAAAACAGCAGGTTTTACTGTGAAAACAAAGGTTACAAAGGAGAATACATATTGTCCTCGAGAGTCAATGATGGAATTTGTGACTGCTGTGATGGATCAGATGAATACAGTGGTGACAAAATTCAGTGTGGAAACATGTGCATTCAACTTGGTCTAAAGCAACGAGAAGAACTGTTAGCCAGTAAGAAGTTAAGGGAAGCAGGTTACAAAGTGAAGCAAGAATATATGCAGAAAGGAAAGATTGCTCGAGATGAAAAACAGTCTCGACTAAAGCAGGTGGAACAAGAACAAGAGGAGATGATTAACGAGAGAACAGAACTGGAAGCTAAGAAGAAAGAAGTGGAAGAGCCTGAAAAGGTTGCCAAAGATGTACATGAAGCAGCTTGGAATGAGCAGAAGGCTCAGAAAGAAAAAGAAAAGGAACACTCTCATGCTCTGCAAGTGTTCGATGAACTTGATGTGAATGACGATGATCATGTTGACGTTCATGAGATGAGAACGCATGAAGAGTTTGATGTTGACTCAGATGGTACTGTTAGTCACGATGAAGCGAAGGAATACTTAGAGGACTTGGAGAAGGCCGGTAAAGATGAGTTCTTGGAGAAAATCTGGCCCAACATCAAAGAAATTTACAAATCGGCGAAACAAGAAGCGGAAGATAAAGGTGACAAGGAGGGAGAAAACCAGGAGGGTGACAGTGAAGAGCCATCAACCACAGAAACAACGGTCTCACCGCCTCCAGAAACGGCTGGCCACCCATCCCCACCAGGCACACCACCCCTAACCCCACCCGTTGATTTTGATGATATCGAGGAAGGTCACCACGAAGAGGATGATGAAATCGATGATGATGATGATGATGATGATGATCGTGTTGATCATTTCCCAGCTACGGAAGAGAAAAAAGATGAAGATGTAATGCCAGAGTATGACGAAGAGACAAAGAGATTAATTGAAGCTGCTGATGCAGCAAGACAGAAGTATGACGATGTTGATAAGAAAGTGAGAGATATTGAGAACGAGATCTCAGGATTAAAAAAATATTTAGAGACAGATTTTGGTCCAGAGCAAGAATTTGCTTTTCTTGAGAATCAGTGTTTTGAATACAGTGATAGAGAATACACGTATAAACTGTGTCCGTTCAACAGAGCATCACAGCGGCCCAAGGTTGGGGGCACTGAAACCAGTTTAGGATTATGGGGTCATTGGGAGGGATCTGGAGATAACAAATATTCAGCACAAAAATATGAAAGAGGTCAAAACTGTTGGAATGGACCCGATAGATCTGTCAAGATATTATTTCAGTGTGGTTCAGAAAATGCCATACTGTCTGCATCCGAGCCTAGTCGATGTGAATATCAGTTTGAATTTGCAACACCGGCTGTTTGTAAACCACTGTCTCTAGATGAAGAAAAATCAGAATTACACGATGAGCTTTAACATTAACTGTTCATTTCAAACAATTTTTTTTTCACATTGTATCATTGTTTGATTATATCTGTTCATTGTTTGCATCATTTTCATTGCTGAAAACATGACCTTTTAAACTTATATTTGAAGTGCTTTTTTTCAAGTAGGCCACTACTTACATTTTCCGCCCTTGTGATGTGCCAATTTTAATACAAATAATTTATTATAGAGCCTAAGCACATCCATATTGACCAGAAAAAAGAAAGAAAAGAAAGTTTATTGTAGAGGGAGTATTGCTTTAAAAAAAAAAAAATTAAAGTTCTTATTGTCTTTTCAAAAATAATTAGCGACTTTAACCTATTACACACTTCTCACTCACACCAAATGCTCAATGTCTACTCACCCTTAGAAAACACAAATTCAAAAGTATTTTACTGTTCATATTACTTTGAAATGTACTCCATAAAATTGTTGCAATTAAAATGTCTTTTATGTTTA

Transcript

ctg9-10.7-1

Protein

Gene family

Gene family	Subfamily
-	-

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF13015	PRKCSH_1	Glucosidase II beta subunit-like protein	Family	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR002048	Domain	EF-hand domain	Interproscan
IPR009011	Homologous_superfamily	Mannose-6-phosphate receptor binding domain superfamily	Interproscan
IPR011992	Homologous_superfamily	EF-hand domain pair	Interproscan
IPR036607	Domain	Glucosidase 2 subunit beta-like	Interproscan
IPR039794	Family	Glucosidase II beta subunit-like	Interproscan
IPR044865	Domain	MRH domain	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR12630	N-LINKED OLIGOSACCHARIDE PROCESSING	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0005509	Molecular Function	calcium ion binding	Interproscan
GO:0006491	Biological Process	N-glycan processing	Interproscan
GO:0017177	Cellular Component	glucosidase II complex	Interproscan

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID	Source
-	-	-	-	-	-

Expression pattern

1. Expression trend for ctg9-10.7-1 global RNA-seq network