Gene detail

Detailed information of ctg866-1.14-1 in Gigantopelta aegis Gene info

Gene ID	Annotation	Chromosome	Start	End	Strand
ctg866-1.14-1	SERINE / THREONINE RACEMASE FAMILY MEMBER	chr3	27696835	27707712	-

Gene Structure

More details in Jbrowse Sequence

CDS

ctg866-1.14-1

TCTGCCTCTATTGGGAAGAAATGGTCTGCTGACTGCTATTGTCAATTTAGTTTGTCATGTCATCAGAACTTGTTAACATTAAAAAAATAAAAAATGCTTACAACAGAATATCTAAATATGTTCATAAGACACCCGTTTTTACTAGTTCGGCTGCTGATAAAATGACTGGCAGAAAATGTTTTTTCAAAGCTGAAAACCTTCAGAAAACTGGATCATTCAAAGTCAGAGGGGCCCTCAATGCAATACTTGCATTGAAAGAAAAAAATCCAAATGTTTCTGGTGTGGTAACTCACAGTAGTGGAAATCATGGTCAGGCAGTTGCCTGGGCCACAAGTGTGGCTGGCTTCCCATGTTCTGTTGTTGTTCCAGAGTACGCTCCTGAGGTGAAGAAAACGGCAATACGAGGCTATGGAGCAGAACTGGCTGAATGTGGATCTCTGCCCACAGATAGAAATGTAGTATGTGACAAAATATCTACAGAGAAAGGCTATGTCATAATTCCACCCTATGACCATGAAGATGTTATTGCAGGGCAGGAAAGCCGTTGTGAGACGTGCTGTGTTAGGCCTGGCGTTGTCATGTTGGAACACTGCGTTGGCGTTGGCCATAACTGGAACGATGTGTGGCCGGAGGATCTGGTCAATGTAGCCCTGTGCATTCAGGTTGCCCTGCACGTGGACCAGGGAACTGTTGCACTGGAACTCCTAGACCAAGTTCCGGACCTTGACGCCATTTTGGTTTCTGTCAGTGGAGGTGGATTATCTTCAGGGATTGCCATTGCTGCAAAAGCTATCAAACCAAACATTAAAATTTTTCTTGTGGAACCTGAAGGAAAACACATGGAAAAATGTCTACGAGAAGGAAAAAGATTATGGTCAGATCCTCCCAAATACCTGGACACCATAGCTGATGGAATCCGTCTGGAACAACCTGGACAATTGACTTTTCCAATATTAACACAGCTTGTAGAGAAAGAAGTCTTTTCATTGCTGGTTATTGAGGCAGCAGCTGGAGCAGCAGTGGCAGCCATTTTGTCTGACAAGATGAAGAAGATGGACCCAAGTCTTAAACATGTTGCTGTTATTTTGTGTGGGGGCAATATTGACATAGATCATCTGCCGTGGTACTGAACAGGAACATTACTAGGAGGGGAGGGGGCAGGAGGAGGGATTCTGGAACAGTTGTCTTCCCTAAAAATGTCTTTAAATGTGCCCATTTTATTTAAAAGTTCCCTTTCTGTCTACTGAAGAAGATCCTTGTATTACAATATCTATTGAAGTCCTGGTTATTTTACTACCCTATCTCCCTAATTTGTTTAGGCTAGCTATGATATTGCTAAAAAAAAAATAGATTCAGTTTTAATATGGGCACTATCACAATATCTTTTATCCTGCAACCACTGTTCCTATTGACTGATTATAATGACCAATTAAAGCAAAGTCATTAACATATACTAGCAGATTAGGACTTGTGACGTAATGTACACTTTGATGTCACTTCCACAGATATGTGGTGAAACCATTCACTTGACTTGGGTAATCATACAAAGTAACTGAAATAAACAGGAATAATAGTTTCAGAGCAAATAGGGAATTGCTTTGGGCAAGCCATGTGGAATTCCACATTCTTACCTTCTAAGAATAAACCAGTATCCCCACATGATTAATTAGTTATTCTCTATGAATATTACTGACGCCATAACCGTAAATAAAATGTGTTGAGTGCATCATTAATTAAACATTTCTTATGAATATTAAGAGGCCTTGTACATAAAACAAAATGAATACCTTGTATCATTTTATTTCATTTAAAACGTTTTTATCAGTATAGTTAATATGTTTTTATCCTGCTACCACTGTTTCTATTGACAGAATATGATGATGGGTAAAGACTTGATGTCACTCATGTGTTATACCCCACTTCCGGTCTCGTTGCCATGGTTTCTTTTGTTAAAACTGTAGGTGTATTCACTTCATTTTAAGGAAAAGTGTAGGTGTATCGGATACACCCACACTTTTTTTTTAAACTGCAAACATTTGAAACAAAAAGTTAAAAAGCTGTAGAAATAAACCACTTTATTTTCAAAATTTACAATGAAATTTCAACAGTGTCTCCATCGTCCATCCACGAATGCACTGTACAGCACACCATTTGAAATATATCGATTGATTCATTGGCGATACCTTGCATTTGCATATAACAAAATTAAAATCCCATTTTTCAACCAATAGAAAGAGCTTCTCAAAATACATGTTTCTGCATTTTATTTTAACCAATAGAATGAACAATCTAATTACACCTGCACATTTATTCATGGCACCTTCCAATGAGATTTATAACACAATTCGCCTGTTAAACATTATGCAGAATTGTATCTAGCAGGGGGGAGGGGTAGCTGCCCCCTCCATTAATTTCCCTCAAGCCTTTTTCATTTTTATTACCAATTATTACTGTCTGTAAATATTAAAAATAGTGTTTTAGATAATTCTGTATATAAAAATATCAGCAGGACATTACTTATTTCCTGCCATCCCGAGAAAAAACCCCTAGATGCCTAAAATGAGTTTTAATATAATCTGATCCCATTAAGGCCCTAACCCGCATCATTTGCATGTGAAACACGGACAAGGTCGAATTAGACCTGATTGATACTCCGAGAAAAACATGAGGGTCACGACGTGTGGCCACGTTATTTTTGTTTAATTAACTACTATTTTCCATTTATTGATCTTATTTATTGTAGAAGTGATATAATAATTAACTTGACCTAAAGTGGGGTATAAGTCAGTTGTACCCACACTTACTCAGTGTATCAGTAAATATCTCAACAGTTTGTGTAGGGATATTCACCAATACACCTGTAAAGTGTGGGTATAACTATTACATGTCACACGCATAGCCTACATTACAAAATCGCTCATTGTACAATGTGGCTAAAATAACCGAAATAATAGCTTTTCCCCTTAATTTATATGGTCTACAGGATAAAGATAATAACTAGTTAATGACGTCGAATATCTGCTTTATCCTGTTCAGGCCGAATGAGAAATTCCCATTCTTATCTTCACAGAATAAAGCAGATATCCGACGTCATTAACTAGTTATTCTCTATATAAATTCAATTTATGATGTGCTCATAGCTTCCTAATGTTCTACAAAATGTGTGGTTCTAAGTCAACTACAATGAATGAATGAATGTTTAACGACACCCCAGCATGAAAAATACATCGGCTATTGGGTGTCAAACTATGGTAATGCAAATAAATAAAGTGATGGTCAGCATCAATATAAAAATTCAAGACTTAAACAAAAACAGTGTAAAGAACTGTGGAAAAACACAAATATCACAGAATTTTACGGATACTGAATTTGACTCAAAACTTCAATTTTGTGCTGTATTGACCATTCTCAAAGAAAATGTTACACCCCTGCACCACGGTGAGGTTACACTACAACTACACTGAGTCAACTACAAAGTGCTGAATGTTTGAATAACCACTGCCTTTTACCTAGGATCATTTACAATGTAAAACAATAAAGTGTGCATGTGTGTATGTATGCCCACATGTGCATGCATATGCATGTATGTATGTATGCATGTGAAGAGTTATTATTATTATTACCCATATTTTGTTTTTTTTAAATATAAAAATTATATTTCATTGATCATGTTAAAAATTATGCATCAAAT

Transcript

ctg866-1.14-1

Protein

Gene family

Gene family	Subfamily
-	-

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF00291	PALP	Pyridoxal-phosphate dependent enzyme	Family	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR001926	Domain	Tryptophan synthase beta chain-like, PALP domain	Interproscan
IPR036052	Homologous_superfamily	Tryptophan synthase beta chain-like, PALP domain superfamily	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR43050	SERINE / THREONINE RACEMASE FAMILY MEMBER	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0000287	Molecular Function	magnesium ion binding	Interproscan
GO:0003941	Molecular Function	L-serine ammonia-lyase activity	Interproscan
GO:0005524	Molecular Function	ATP binding	Interproscan
GO:0018114	Molecular Function	threonine racemase activity	Interproscan
GO:0030170	Molecular Function	pyridoxal phosphate binding	Interproscan
GO:0030378	Molecular Function	serine racemase activity	Interproscan
GO:0070179	Biological Process	D-serine biosynthetic process	Interproscan

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID	Source
-	-	-	-	-	-

Expression pattern

1. Expression trend for ctg866-1.14-1 global RNA-seq network