Gene detail

Detailed information of ctg825-1.6-1 in Gigantopelta aegis Gene info

Gene ID	Annotation	Chromosome	Start	End	Strand
ctg825-1.6-1	60S RIBOSOMAL PROTEIN L6	chr3	1766707	1779179	+

Gene Structure

More details in Jbrowse Sequence

CDS

ctg825-1.6-1

CTCGTCACTTCCTTTTCCTTTTAGAACAGAGTGACCGAAATGGGTGCCAAAGTGAACCCAAAGCCGAAGCGGAAGAAGGTGAGGAAGCCGCAGGTGGCGGCGAAGAAGACGACTCCCAAACTGATGATGGAGAAAGAGATCGGCGGAGATAAGAACGGAGGCAAACGATTAGTCCGCATCAAACGGCTGCCCAGGTTTTACCCGACAGAAGACAAACCCCGTAAACTGAAGTCCCGCAAGAAGCCGTTCAGCAAACATCATCACAAACTGCGATCATCCATAACTCCCGGAACCATCGTCATCATCGTGGCAGGCAGACACAAGGGGAAGAGGGTTGTATTTCTGAAACAGTTGAAAACAGGACTTTTGCTTGTCACAGGACCATTCCACTTGAATGGCTGTCCTCTGCGGAGAATAAACCAGCGCTATGTGATAGCTACCCGCACTCGTCTCGACATCAAGGGCCTCAAACTGCCAGAGAGACTGAATGACGATTATTTCCGCAGAAAGAAGCTTCGCAGACCAAAACACACAGAAGGTGAAATCTTCGATACAAAGAAAGAGGTCTATACAGTGTCAGATGAGCGGAAGGAGGATCAGGTGGAGGTAGATAAACAAATTCTCGACGTCGTGCGCAAACACAAAGACAAGAAATTGATTTTCGGATACCTCGGAGCAATGTTCTCGTTGAAGAACCGAGAATATCCTCACAAAATGCTCTTCTAAATGTCAAATCTGAACTGTAAAATAAAACAAAAAAACGTGGAGTCGTGAATGTGTTCCTTTTTCACGTTAATACTGTTTTAGATTTTAAAAAACCATTAACATCCCTTGTAATTAACAACATTGTCAAAGCAAAATGAAATGCCTCGGCATTGTATTTTAAAATACTTTTGCCATGGCTTCATTACATTGCATCATACAAGATGAACCATCGGAATCTCCACATTGAATGGGACAAACCCAATAGCATGGGATACTGGAGACTAGATGAACATAGTTGATCAAATTTGTTCAACCATATTTTTTGACCAGGTAATCCGGGCCGACTAGGTAAGGCCTGCTTTCCATCAACAGGATTTGATTGTGTGTTTCTGCGTGTGTAATTGTGGTTTTGGTAGCGGATTGCTAGTAAAATGGGACGTCTAACTGTGCTTTAACTGCTGTGACTCGAGTTGCCAGATTCTCCTGTTTGTTTCTATTTGTCAAGACGGGGGGGGGGGAATCTAGGTGCAGTGAATGACTTTACATGGAATGCAAACGTTACTTTGAACATTCCAGATATTTATGCAGCGATTGTGTTGTATAAATAACTTCACATACTAGTATGTTTCATTCTGGCTGGTTTATTTTGCGCAAGAATGTGTAGCAGTTGAGTGGTATGTGCAATATCCAGCAAAAACGTACAGTTATTTTTTAACTTCGACATCAAAAGATGTGACAACTACTTTCTTAGTACTCCTTCCAGCAGTCGGAAGTTTTAAATGAAATGTGAAGTAAATCATATATGGCTCAAGGAACAAAGGGGTTAAATAGAAAAATAAAGTTCCGATCCAGATCGCAGAAGATAATTATCTGAGAGTTCGAAAAATAGTAACGTTGAATCGGGGTTGGGAATTCTCGGGTCCATGGTTTTCCTCTCCTGGAACATTGCATTTCCTCGCATTTTAATCGTCCTTGTCCCTGGATCCCTCTAGATTTACTCCTTTTTTTTTTTTTTTAACAGTTCACCACCCCAGACCCCACTAGATTTGCTCTTTTACAGTTCACCAATTCTCTCTGTTCAATAGGTATGTAATAAATTAATATGTCCTCCAACCTTTAAGAATTCCTCTTGGTGGGTGGATCTACCGATTGGTTTGCTGTTCTAACCAGGTCTACAACAGACGTATCCAAGGTTGGAGTACATGCTGTTCTTGCTGTGCTCAAATGGGTTGTCTTGTATCATGACCAGTAATGACATACATTACAAAAAAACAAAAAAGGGGTGTACTAATGGGAACTACTTTAATAGTTTTCTCTTGTTAATATTTAGCCTGACCTGCAACAAAAGGCATTTTCCCTCGTGTTAATTGGGGCGGCTTTAGCCCAGTGGTAAGGCTAGATGTGTGGGATCAATCCCTGTCGTCTGTCCATTTGGCTATTTCTCATTCCAGCCAGTGCACCACGACTTGTATATTAAAAGCCGTGGTATGTACTACCTGGTCTGTGGGATGGTGTACAGATCCCTTGCTGCTAATCGAAAAGAGTAGCCCATGAAGTGGCGACAGTGGGTTTCCTCTCTTAGTATCTGTATGGTTCTTAGCCATGTCCGACACCGTAAATAAAATGTGTAGAGGGTGTCGTTGAAATAAAACATTTCTTTCATTCTTATGTTAAGTCTCAATATCTCTAAATTGAAAAAAGGAACACATAAGTAGTATCCCTCATCTCATCTCATCTCATCTTGTGGCCATAGGAAGCTAACAATCTCATCTCGTGATCCTAGGAACCATGTCATCTCGTGGGCCTAGGAAGCTAAGCATGTCATCACGTGGTCCTAGGA

Transcript

ctg825-1.6-1

Protein

Gene family

Gene family	Subfamily
-	-

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF01159	Ribosomal_L6e	Ribosomal protein L6e	Family	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR000915	Family	Large ribosomal subunit protein eL6	Interproscan
IPR008991	Homologous_superfamily	Translation protein SH3-like domain superfamily	Interproscan
IPR014722	Homologous_superfamily	Large ribosomal subunit protein uL2, domain 2	Interproscan
IPR041997	Domain	Large ribosomal subunit protein eL6, KOW domain	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR10715	60S RIBOSOMAL PROTEIN L6	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0000027	Biological Process	ribosomal large subunit assembly	Interproscan
GO:0002181	Biological Process	cytoplasmic translation	Interproscan
GO:0003723	Molecular Function	RNA binding	Interproscan
GO:0003735	Molecular Function	structural constituent of ribosome	Interproscan
GO:0005840	Cellular Component	ribosome	Interproscan
GO:0006412	Biological Process	translation	Interproscan
GO:0022625	Cellular Component	cytosolic large ribosomal subunit	Interproscan

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID	Source
-	-	-	-	-	-

Expression pattern

1. Expression trend for ctg825-1.6-1 global RNA-seq network