Gene detail

Detailed information of ctg820-1.4-1 in Gigantopelta aegis Gene info

Gene ID	Annotation	Chromosome	Start	End	Strand
ctg820-1.4-1	PICCOLO/BASSOON	chr3	6435123	6491157	-

Gene Structure

More details in Jbrowse Sequence

CDS

ctg820-1.4-1

ATGAGTACGGGCCTGTGGTACCACGGCTCGCACCCGGAATCAGAACTACCTCTAGAGCGGGAACTAAACGGCGAACCTTACCAGACTGACGAAAACGAAAAAGGTAGAGACCACTTTCAACTGATGCCACCGACGACTGACGTTTTGTCGGCGGAGTCACGCGGAGAGACCCGACATGCTAATACTGGTCTTCCGGAGACGGCCGAATCTCAGAGCAATGGTCCCAAAATGGACTGGTCGTTTGATTCTAGTCAACCAACTTCTTCCCAGAGTTCCTTTGAAATGATACCTCACAAGCCATCAAAATTGAAAGGAACTGGTGGAGTTTCAACGCTCAGCGACCCAGAAGACTTCTCAGATTTCACGTTTGAAGACTATGACGTAGGGGATTTCGGAAGCAAGCCTGTTCCTCCTCCAACTCTTCCTCCCCCTCCTCCTCCTAACCAAGAGAAGGTGCCAAGCGAAGAGCAATCTCCCGGAGCAGACGCCCCCGAGGAAGGGGAGGGCGGACATAAACTGCGCCGCAAGCACAGACCACGGTCACTGAATCTCACACGTTCTCACAGTCTGACCTCGCCTGAGGATGACAGCGATGGCGGCCAGTCGGCTGAATCGTCTGGACCTGCTGCGGCTCCAGCAAAGAGTCCGGAACATCTGTCTCCCGAGGAGCTGCTTTCACAGACAGTGGACGAACCGTCACTGAGTGAGTCCAAGTCACACAGCGAGGTACACGCACTGGGGCCTCCTGACATGACGAACAAGACAATGAATAGCCCGACTCCACCCAGAAGCCCCAGCTGGAGGGAAGGGTTGGAGAGTCCGCCATTTTCACCTAAGAGAAAAGACTCTTATCCCGGGAAACCTCGCCGTGGTTCTCCCGTGTCGCCGAAAGATAAACGTCTCCATTTTACATATACAGATATATCTCCTCCTTCTAGACAACTTTCTTTAGATGAATTATACGGTGACGGGCAGTGCTCTTCGAAGGATAACTCATTTTTTGGGATGCATATGGCTCAGAAGCCTTCTCCTGTATCGCCAGAAGAGGTCAGAAATACGCTCCTGTCGTCGCTAGGGGAGCCACTGCAATTTGAAATGCCAACACGTGATAAATTGCAGACATTCTCTGCGCCGTGTGTTCAGAATCTGGGAAGCTCCGAGGACGTGTCGATGGATTCCGCCCCAGTAATGGACGTGGCGACGTACGCTGCTACTATAGCAAGCAGCACGGCCAGTCTCACGTCGATGAGCGTTTCGCCAACAAATCTCAGCGTGTCTTCCAGCTACGATTCGGAGCAGGTGTCTCCCGAGTCGATGGGAAGTACGGACTCCTCGCCGGTGTCTCCCGGCTACTACGACAACAGTACTCCAGAGGATATGGAGGACGTGGAGCTTGCGGATCCTTCTACAAAATCCATTGATTATCAAGGAAGTAAGCGACAGAAAGCCCGGCCTCCAACAACAGACTGGTCGCCCGTTATCGACCTGTCTCCCATTCTGGACGTGTCGCCTTCTGTGGAGGAGGCGGAGCAGGAGGACATGCTGGCTAAGCAACTGGAGGAGTTCGAGAGACAGCAGTCGCTCACTGAAGGGTTGGACGTGGACGACGACAACGGTGAAAGTGGAGAGGTCAGCGATAAAAGCGACAAATCCAGCAAAGATTCCAACGAGGAGGAGTCGTTCCAAGGGTTAAAGCGGTACGACATCATGGAAGACATCAGCAGGATCGATGGGTCGGGACTCCACGAGGTGAAAGTCATGGAGTACAATGGGTCCCAGAAAAACATGGATGCAGAGAATGGAAATGTTCTTTTCGAAAGCGAAGATGATGGTGATTCTTTGTTGTTAATCTGCACAAGTGTCGCTCAGCCGCCACTTCCCACGAGTTCCAGTCCGTATTACTCCACCAGCATGGGGCAGCCTCCCAGATATGCGAGTGCTTCTCGGTCCTCTATGATCACGTCGCTACAAACTGAATCTGATACAAACACAGAGTTCAGAAAGATAAACAATGATCTTCAGGACATTCTCAAATCTGGCGCTGTTGACGTGAAACCCATCCCTCCGCCCAAGCCCCGTCGAAAGCTTCCAGACCCGTCATCAGACATGCTGGACACACACTACTCCGAAACAGAGAGAACATTACCATCCATATCAGCCAAAGCTCAAGAAGCGGATTCCATCGACGAGGCGGCCAAATTGTTAGATTCTTCGAAACATCCGGTGGCGGCTACTCATATCCTTCCACGACAGGATTCTGGGGAGAAACGGAAGGCGAAGGACTTGAAAGCGAAGCCTAATCCGCTGCTTATTCAGCACATTGAGACCGAGGAACAGTCTGTATCGCCACATTACAAAATACTCGACTCGCCCCCAACTCCTGAACAGAAAGCCGTGAGGAGGGAGTTTTCAGAGAGTACCTCCGTGTCGCCCTCCTCGTCCCCAGATCGCGATATGTACATGTTCCCATCTCCAGTGACTCCCCCTGATTCAGATTCGTCACCGCCCAAACCCCAGTCTCCGTCGTCACCTGGCACGGATGAGGATGTGGTGGGCAGAATGCCGGTCAGGACTCTGTCGTTCGGCAGCAATCTGAATGGAATAGCTGATGACGTCAAACCTATTGAGGTTTCAGAAGAAATTAGTGAATCTCGTGCCAGCGTCAGAGACAAAATTAAAGCTTTTGAAATGATTGCCACCCAACCATGCGAGAAGGAAGCGGACAGACCGGCGGTGAGGGAACACAAACCCGACACGCACAAAGTGAGGCGAAGACTCCCAGCGATCCCAATGGGGGAACCGCCCGTCCTCACGCCCAAAGCCAAACTGAAAGCTACAAAACCGGTGAAGCCAAAAGCAGCAGAGAAGCCCAAATATCCAAGTGAGAAGAAACCGGCCTCTTTGACGAGTGATGATTCAATGAACGAGGATGACATGGAAGTAGCGAGGATCAATAAAATAGAAGATAAACGAAAGCCGCTTGTAGATACTCGCAAAGCGAAGAGCCTGGATGCCAGCGACAATGTGCCAGGGGAGCACGCGGCTATTCAGGCCGTAGAAAAAATAAAGCTGCAGAGAGCCAGCTCCGTGGGATCGACGCCAAAGGAAGAGTCTGACGCAATTATAGATTCGTTGATAAATATTTATGGGATACCATGCACGGAGGCGATGAAATGTCTCAAGAAGAGGTTACAGGAAGAGTTGAGGAGGGTTACTCGGGACCGCAAGAGGAAACTGGAAGAACTCGAAGAAATTAGAGCCTTACAGATGCAGATTGGATCGCTCAAGTTGGAGGCGGATCTGTACGCAGGAAGACACGGTTTTCGGGGGCGTAACGGAAGACGTTCTCCGGCCTCCATTCAGCTGGAACAGGAACTGCGAAAGAGGAGCGGGGGTTCATCCCCGGCAACGTCCTTGACACCGAGGTCATCTCCCCAGGTCACGCCTAGGAGACAGAGACACAAGAGACAGTCCTCGGATCCAATGATCGCCAAGTTTTCGCCTATTAAAGAAGACAGGGACATTGAAGCTGATTTTCACGCAAGAATCAACGACAGTTCGGAAAATAAACAGAGTTCTAAATACTCAACAGACGACAGTTCGCAGTCTGGCGTTAGTGACACTGAAAGTACCAGATCCGAGCCAATAGAGAATTCGAGATACAAGAAAATTAAGCCGTCTGCTTACGCTCGAATGTTTTACAGCGGAATCACGTCATCGTCTGAACGAATCGGGACGGAGGGCGGACCGGGCCTGGGAGAGGTGCCTTTGGGAGGCAGCAGATCGGAAAGCCAGCTGATCGGAGGATCACGATCAGGATCGCGGACGCCCAACTACTATTCCGACAACGACGAAGGCAAGTCGAAGGAGGAGAAGAAAGCACGACTACAGTACGAGATCGACAAGAGAAAGAGACAGCTCAAGGAGACCGCTAGACTGAAGAGCGAGTTGATGCGGCTGGCGAGAGCACGCCAGGCGATGATCCACAGCTACGACGACATTCCCAGAAGCTACGAGCCGATCTCTTACAGCAGCAAGCGCGTGATCCCCACGGGCATCATCAGACCTCTGGACGACGATCCTGGATACGACCTGTACGGCGGCGGCGGAGGAGTGGGGCTGGGAGGAGCAGACGAGTGCTACATGTACAAGGATTCCCTGGACAGACAGTCCGGCTACAGCACCAACTCCAACTACAGCTCCACGGAGTATCTGGCCCACAGACAGGAGACGTCCTGGCACCAGCGGCCTGACGAGCCCATCTACGTGAACCAGCAGCAGCTGGTGAGAGACTACCTCGACTCCGCATCATTCGCCGACCAGCCCAACATCCCCAAACGCATGGACTCATACCCGTCGGTCGCCACCATGGAGCCGACCTACGTGAACACCAGCAGGGACCCCCGGATTCCGAGCAGCGCCACCCTTCCCGACATGCACTCCAATCGGAAGGACATTGACTTCGTGCCGGGCCGAGAGCTTATCTCGATGAATACGTTCTCAGACACGTCGAGTCCGGCCAGTGACTACACGCCCGCCATGCCGCTCCTGGGGGACGTGCCCACCAAGTCCAGGACCATCCTGCACAACATCGGCAGTGGAGGAAGACCGGTGTCGGCCGAGTTCAATTTCCCAGGAGGGGTAGAAGATTTGATGAACCCAGTCTACCGCGCCGAGAGTGACAACAGCGTGGACGCCGACGAACCCATCATGAAGCACATGACAGAGGGCGGGGTCACCATCCTCAAACAACTCGACCGCAAGAAGAGACCGCCTCCTCTGGAACCCACCAAATATCCATTCCCCACGAAACGAATTCTCATCACCAGAGATCCCAAAGATCGCCCACTCTCAGGACGAAAAGGGAATGGGATTGGGATGAAGATAGTGGGCGGGAAGCAGATTCCGGGCACGGACGAGATCGGCGCGTATGTGGCCACCATCTACCCGGGAGTGATCGCCGAGCAGCTGCACGGGGAACTGGACGTGGGAGACCAGGTGCTAGAGTGGAATGGAATGTCCTTGTCTGGGAAGACGTATGAGGAAGTGCAGCAGATTATCACCCAGCCAAACGGCGAGATCGAGATGGTGGTCAGGCCGCTTTCGAGGTCGCATAAAGGTCGTGACCACATTTCGGTATCGTGTGCCCAGCCCACTAGCTGTCACTCATCGTATGACAACTTAGCCAAGGATCCACCTCCTTACGAAGATATAGATTGCCGCTCTGGTTCCCGACAGGGTGTCGATCCACGCCAGCTTGCAGCACAGCTAGAAGAGATCAAGGAGATTGCCTCCCCTGAAAACTCCCCTTCCTCCCAGCAAGACTTTCTTACCCCACGCATGCCCTCACCCTGCAGCACTCCTCGCCCAGACCCTGCTTCCTCGTCGTCGAGCCATAGACAGAGAGTTCATGTCATTCAAATAGAACCCAACTCCTCTTTCAGCAGGCAGGCAGTAGGTGGGCAGACGACCGGTAAAACGAGTCAGACGAGAGCCTCCTCGAAAGGCGGGAACAGCCACCAGGTAGCGTCAGGTTCGGGTTCTGGACAGAGAGACAGTAGTGGTGGTGCCTACGCCGGTAGATCCGCCGCGGATAAAGCCGAGCCTGGCATTTCAAGTATCCCTGATCCACAAATTCTCTTTGAAAAGGTGTCCCCCTCGGCCAGGAGAAGGGCTAAGAATGCTGATGCCGATCCTCCTCCCGTACAGAAGTCAAAGTCGAGAATCTCCAACCTAATCCCCGACCCGTGTGTTAAGAGGGTGGACAGCGGAGAAGACTTTGATAATATGCAATACGAAACACCTCGCTCAAAACGTCAAGCTCAGAACTCCAGCTTCCGCGAGAGACGCCAGTTCTCGGACGACGGCGATCAGAACTTCCCGTCACAACCCAAACACAAGACTCGGAGCCACTCGTGTCGTGTCCCGCGGTCCAAGCAGGAGAAAGGAGGGGAGCCTGTGTCTAAAGACGATCAGTATATACCATCTTCCAAACAAGACAGGTCACCAAAACCGACCCCTTCTCCAAGGATCCCAGCCTCTAAGGGTCTGCCCTCACCACAACAAGTGCCAAAGGTCAAGGACCAATCGACAGACACGCACCCAAAACCAACGCCTCGCCGCAGGGCAGCATCCAGGGCAGATCCCGAGGTTGCTGCGGCGGCGAAGGAGAGCGACAAGAAGACGGATTCGTCATCTAGTTCTGGTCTGAGAGCGCCATCTCACGATGTCGCCATGGCTACCGGCAACAGTGTTTCCAAACAGAAGTCCAAGAAGAACGACAAACGTCGGCAGACACACGCGGAGGAAAATGACTTCTCCCCACCCGACCACAAGTCACCAGGAGACGTACAGATCCAGATCAGCCACGATGAGTTTGACAACACCCTCAACGTGCACATCATCCAGGCTCGCAACCTGAGACCACGTGACATAAACGGTCTGTCAGATCCGTTTGTCAAAGTCTACCTTCTGCCTGGACGAGGCCCGGAAAACAAGCGGCGGACGAAACACATCTCCCGGACGCTGAACCCTCAGTGGCACCAGACCCTGATATTCCAGAACGTGGCCCGGATGGAGCTGCAGAACAAGGTGCTGGAACTGACGGTGTGGGACTACGACCGCTTCAAGACCAATGACTTCTTGGGGGAACTCATCCTCGAGCTGTCAGAAGACGCCTTCCTCGACAACAAGGCCCACTGGTACCCACTGCGAGAACGTGTGGTCACCCACAGCTTCGAGCTGCCCAAGTCGAGCGTGCCTGCACCCCGCGTCATTCCAGAAGCAGCCGAGTCGTGTAGCGATGACATCCCGCTGGGGAAGTCACCAAGACCGCCAAAGAAAACTAGGAGACAAGCTGCCGGTGATGACTCCTCCAGAACAGAGCCTAGAAGAGGATCCCTGGGAACGCTCGACCAGCTCAGCAAGCCAACTCCACCTGTGGGTGCTCAGAGAATTATATCATCGGCAACCAACTCGCCTGCACCGCGCCGCAAACCACGTGATTCACGTTCACCCAGCAAGCGATCAGATGAGTTTTGA

Transcript

ctg820-1.4-1

Protein

ctg820-1.4-1

MSTGLWYHGSHPESELPLERELNGEPYQTDENEKGRDHFQLMPPTTDVLSAESRGETRHANTGLPETAESQSNGPKMDWSFDSSQPTSSQSSFEMIPHKPSKLKGTGGVSTLSDPEDFSDFTFEDYDVGDFGSKPVPPPTLPPPPPPNQEKVPSEEQSPGADAPEEGEGGHKLRRKHRPRSLNLTRSHSLTSPEDDSDGGQSAESSGPAAAPAKSPEHLSPEELLSQTVDEPSLSESKSHSEVHALGPPDMTNKTMNSPTPPRSPSWREGLESPPFSPKRKDSYPGKPRRGSPVSPKDKRLHFTYTDISPPSRQLSLDELYGDGQCSSKDNSFFGMHMAQKPSPVSPEEVRNTLLSSLGEPLQFEMPTRDKLQTFSAPCVQNLGSSEDVSMDSAPVMDVATYAATIASSTASLTSMSVSPTNLSVSSSYDSEQVSPESMGSTDSSPVSPGYYDNSTPEDMEDVELADPSTKSIDYQGSKRQKARPPTTDWSPVIDLSPILDVSPSVEEAEQEDMLAKQLEEFERQQSLTEGLDVDDDNGESGEVSDKSDKSSKDSNEEESFQGLKRYDIMEDISRIDGSGLHEVKVMEYNGSQKNMDAENGNVLFESEDDGDSLLLICTSVAQPPLPTSSSPYYSTSMGQPPRYASASRSSMITSLQTESDTNTEFRKINNDLQDILKSGAVDVKPIPPPKPRRKLPDPSSDMLDTHYSETERTLPSISAKAQEADSIDEAAKLLDSSKHPVAATHILPRQDSGEKRKAKDLKAKPNPLLIQHIETEEQSVSPHYKILDSPPTPEQKAVRREFSESTSVSPSSSPDRDMYMFPSPVTPPDSDSSPPKPQSPSSPGTDEDVVGRMPVRTLSFGSNLNGIADDVKPIEVSEEISESRASVRDKIKAFEMIATQPCEKEADRPAVREHKPDTHKVRRRLPAIPMGEPPVLTPKAKLKATKPVKPKAAEKPKYPSEKKPASLTSDDSMNEDDMEVARINKIEDKRKPLVDTRKAKSLDASDNVPGEHAAIQAVEKIKLQRASSVGSTPKEESDAIIDSLINIYGIPCTEAMKCLKKRLQEELRRVTRDRKRKLEELEEIRALQMQIGSLKLEADLYAGRHGFRGRNGRRSPASIQLEQELRKRSGGSSPATSLTPRSSPQVTPRRQRHKRQSSDPMIAKFSPIKEDRDIEADFHARINDSSENKQSSKYSTDDSSQSGVSDTESTRSEPIENSRYKKIKPSAYARMFYSGITSSSERIGTEGGPGLGEVPLGGSRSESQLIGGSRSGSRTPNYYSDNDEGKSKEEKKARLQYEIDKRKRQLKETARLKSELMRLARARQAMIHSYDDIPRSYEPISYSSKRVIPTGIIRPLDDDPGYDLYGGGGGVGLGGADECYMYKDSLDRQSGYSTNSNYSSTEYLAHRQETSWHQRPDEPIYVNQQQLVRDYLDSASFADQPNIPKRMDSYPSVATMEPTYVNTSRDPRIPSSATLPDMHSNRKDIDFVPGRELISMNTFSDTSSPASDYTPAMPLLGDVPTKSRTILHNIGSGGRPVSAEFNFPGGVEDLMNPVYRAESDNSVDADEPIMKHMTEGGVTILKQLDRKKRPPPLEPTKYPFPTKRILITRDPKDRPLSGRKGNGIGMKIVGGKQIPGTDEIGAYVATIYPGVIAEQLHGELDVGDQVLEWNGMSLSGKTYEEVQQIITQPNGEIEMVVRPLSRSHKGRDHISVSCAQPTSCHSSYDNLAKDPPPYEDIDCRSGSRQGVDPRQLAAQLEEIKEIASPENSPSSQQDFLTPRMPSPCSTPRPDPASSSSSHRQRVHVIQIEPNSSFSRQAVGGQTTGKTSQTRASSKGGNSHQVASGSGSGQRDSSGGAYAGRSAADKAEPGISSIPDPQILFEKVSPSARRRAKNADADPPPVQKSKSRISNLIPDPCVKRVDSGEDFDNMQYETPRSKRQAQNSSFRERRQFSDDGDQNFPSQPKHKTRSHSCRVPRSKQEKGGEPVSKDDQYIPSSKQDRSPKPTPSPRIPASKGLPSPQQVPKVKDQSTDTHPKPTPRRRAASRADPEVAAAAKESDKKTDSSSSSGLRAPSHDVAMATGNSVSKQKSKKNDKRRQTHAEENDFSPPDHKSPGDVQIQISHDEFDNTLNVHIIQARNLRPRDINGLSDPFVKVYLLPGRGPENKRRTKHISRTLNPQWHQTLIFQNVARMELQNKVLELTVWDYDRFKTNDFLGELILELSEDAFLDNKAHWYPLRERVVTHSFELPKSSVPAPRVIPEAAESCSDDIPLGKSPRPPKKTRRQAAGDDSSRTEPRRGSLGTLDQLSKPTPPVGAQRIISSATNSPAPRRKPRDSRSPSKRSDEF

Gene family

Gene family	Subfamily
-	-

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF00168	C2	C2 domain	Domain	Interproscan
PF00595	PDZ	PDZ domain	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR000008	Domain	C2 domain	Interproscan
IPR001478	Domain	PDZ domain	Interproscan
IPR035892	Homologous_superfamily	C2 domain superfamily	Interproscan
IPR036034	Homologous_superfamily	PDZ superfamily	Interproscan
IPR052098	Family	Presynaptic Scaffold Protein Bassoon/Piccolo	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR14113	PICCOLO/BASSOON	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0005515	Molecular Function	protein binding	Interproscan
GO:0030424	Cellular Component	axon	Interproscan
GO:0035418	Biological Process	protein localization to synapse	Interproscan
GO:0048788	Cellular Component	cytoskeleton of presynaptic active zone	Interproscan
GO:0098882	Molecular Function	structural constituent of presynaptic active zone	Interproscan
GO:0098978	Cellular Component	glutamatergic synapse	Interproscan
GO:0098982	Cellular Component	GABA-ergic synapse	Interproscan
GO:1904071	Biological Process	presynaptic active zone assembly	Interproscan

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID	Source
-	-	-	-	-	-

Expression pattern

1. Expression trend for ctg820-1.4-1 global RNA-seq network