Gene detail

Detailed information of ctg803-2.19-1 in Gigantopelta aegis Gene info

Gene ID	Annotation	Chromosome	Start	End	Strand
ctg803-2.19-1	IRON-SULFUR PROTEIN NUBPL	chr13	16548759	16557260	+

Gene Structure

More details in Jbrowse Sequence

CDS

ctg803-2.19-1

ATGGGTGTGCGACAGACTTTGGACACCAAACATCGATCTCTTCGCCACACGATTCAACCATCAGCTGAGGGTTTACGTGTCTCCGGTGCTGGATCCCGAAGCTCTGGATCTCGACGCCTTGGCCATCAGCTGGGAACAGATGGACGCGTACGCTTTTCCTCCACGAATCCTCCTTCCAAGGGTGCTTCAGAGGTTTCAGCTGTACCATTGTCGCCTGTTACTCATTGCTCCAATGTGGCCATCCAGGATGTGGTATCCAGATCTAATACGTCTTGCCGATCCACATCCTTTACCGCTGCCAGACTGGGATCATCTGTTGCTGCATCCCACGTCAAGACTATACCATCCACGTCCGCAGTTGTTCCAACTGCACGCGTGGACTTTATCGCCAAGAGTTTGAGAAAGAAAGGTTTTTTCTTCACAGTCTACGGCGGCCATTTTGAAAGCGCACAGATCATCTACTACTGTGGCTTACAACGTCAGATGGCTTTGCTTTCACCGAGGGTGTGTCCGGCAAAACCTCAAACCTCAGACGATCCAGATACTTCGTCTTGCTGGGTTTTTTGGCTGTATCTGCGGACCACTTTACGATTAAAGGGGTCTACCATCGCTGGGTACGTTTCGGTCATCGCTACTGTTCGTGATGTCGCTACTGGAACGAAGTTATCGGGTATTCCTGAGATCCATAAGATGATCAAAGGGTTTCGCCTTGATGATCAAGTACACCGGTTTCGGCCACCAAGATGGGACCTGAATCTGGTGTTACGAGCGTTATCGACCGCACCTTATGAGCCGATCGAATCCTCTTCCCTGCAAGACTTGATGCGGAAGACGGTGTTTTTACTCCGTTTTGCCACGGCTGCCCGTGTCTCAGAACTCCATGCTCTTGATGTAGACTTGGTACGTTTTCACCAAGATCGGCGTGCAGTCAACTTGGGGTTACTCATGAACTTTGTTGCAAAGAATCAGTTACCAGACCAAGCGCCTCGTTCGTATGTTGTGCAGGCCCTCTCCTCTATCGTTGGTCCGGCGGACGTTGAGGACTTGGCGTTGTGCCCTGTCAGAGCCCTGCACCAGTACATCGAGAGGACCAGATCTTTTCGACAACATCGCAAAAGACTTTTCCTTTCCTGTAACCAGAGTCGGTTGAGGGACCTTACCAAGAACACGGTGGCCACCTGGATCCGGTCTTCTATCCTGACCGCCTATCAGAAGGAGGGTTTACCTGCTCCGTCTGCTTCTAATCCGCATGAACTCCGTGCCTTGGCTGCCACGATGTCCCTGCACTGCAACACACCCATTCAGCACATTATCACTGGTTGGTTCTGGGCTACGGACTCCATCTTCGCCAACTATTATCTGAGGGATGTCTCCACAGAAGACGTTGCCTGGAGTCCGGTGGATTATCTTGTAATTGACATGCCTCCTGGGACTGGTGATACACAGTTATCTATTTCACAAAATGTGCCAATATCAGGATCTGTGATCGTGACGACACCGCAGGACATAGCCCTGCTGGATGCGAGGCGAGGGGCCGAGATGTTCCGGAAGGTGGACATCCCCGTGTTGGGCGTGGTACAGAACATGAGTGTGTTCATCTGTCCTAACTGCGGACACCAGGAACACATATTCGGGAAAGATGGCGCAGAGCGAATGGCGAAAGAGATAAACGTCCAAGTGTTAGGCAAGTTACAGTGCATCACTCGACTAGAAAGAAATATTCCACTTGATAAATCAATCCGAGAACTGTCAGATACAGGACAACCAATAGTCATAGCCCGTCCAGATAGTCCGCAGGCAGAAGCTTATAAATCGATAGCAGCGACTATTGTAAAACAGTTACACAAAGAAAAGACCTAGAATTAACATCACCGGTTTGTGTGAACTTACCTAAACAGGAGCGGATATAGGAATTTTAAAAGAGGAATACAGGGCTCGAACTTAAGAATTCGTCTCCCACGGCAACGGGTGAAACAGTCCACCAACGGCAATTTTCAGCCTGCCTATGGCAATTTTTTTTAAAGTGACATTTGCAGCAAATAAACCTGACTGAAAGGCTATCTTGTTATATGTAGACATCTTTGAAATGTGCAAATGTTAAATATTGGCAGATTATGTACACCTGGTGTATATGTTTTGCCACTGTTGAGGAGCTTTACCGACGGCACAAAAGTGCCGTCGGTGATGCTCTCTACCTATGGCAATTTATATCTCAACGATGGCAATTGCTGTCGGTGCCGCCGTTAATTTCGAGCCCTGGGAATACAAAATGTTGAAAGTACTGGATATCACATGTATGAAGCGAGCAACACCAAGGATACTTTGGCCAGATGCATACTCACTGCATTGTAGGGTGTACTGTGTCTTCCACTACTGGTGTACTGGATCAATGTGGGGCAGGACGTAGCCCAGTGGTAAAGCGCTCGCTCGATGCGTGGTCAGTCTGGGCCCATTGGGCTATTTCTAGTTCCAGCCAGTGCACCACGACTGGTGTATCAAAGGCTGTGGTATGTACTACCCTGTCTGTGGGATGGTGCATATAAAAGATCCCTTGCTGCTAATTGAAAAGAGTAACCCATGAAGTGACGACAGCGGGTTTCCTCCTTCAATACCTGTGTGGTCTTTAACCATATGTCCAACGCCATATAACCGTTAATTAAATGTGTTGAGTGCATCATTAAATAAAAGGCCGTCCATAATGTTCAACATTTTGACAAGCATACAAACTGTATGCGGGGGGGAGGGGGTTAAGGGGCCA

Transcript

ctg803-2.19-1

Protein

Gene family

Gene family	Subfamily
-	-

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF10609	ParA	NUBPL iron-transfer P-loop NTPase	Family	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR000808	Conserved_site	Iron-sulfur cluster carrier protein-like, conserved site	Interproscan
IPR011010	Homologous_superfamily	DNA breaking-rejoining enzyme, catalytic core	Interproscan
IPR013762	Homologous_superfamily	Integrase-like, catalytic domain superfamily	Interproscan
IPR019591	Family	Mrp/NBP35 ATP-binding protein	Interproscan
IPR027417	Homologous_superfamily	P-loop containing nucleoside triphosphate hydrolase	Interproscan
IPR033756	Family	Flagellum site-determining protein YlxH/ Fe-S cluster assembling factor NBP35	Interproscan
IPR044304	Family	Iron-sulfur protein NUBPL-like	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR42961	IRON-SULFUR PROTEIN NUBPL	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0003677	Molecular Function	DNA binding	Interproscan
GO:0005524	Molecular Function	ATP binding	Interproscan
GO:0005739	Cellular Component	mitochondrion	Interproscan
GO:0006310	Biological Process	DNA recombination	Interproscan
GO:0015074	Biological Process	DNA integration	Interproscan
GO:0016226	Biological Process	iron-sulfur cluster assembly	Interproscan
GO:0032981	Biological Process	mitochondrial respiratory chain complex I assembly	Interproscan
GO:0051536	Molecular Function	iron-sulfur cluster binding	Interproscan
GO:0051539	Molecular Function	4 iron, 4 sulfur cluster binding	Interproscan
GO:0140663	Molecular Function	ATP-dependent FeS chaperone activity	Interproscan

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID	Source
-	-	-	-	-	-

Expression pattern

1. Expression trend for ctg803-2.19-1 global RNA-seq network