Gene detail

Detailed information of ctg757-2.13-1 in Gigantopelta aegis Gene info

Gene ID	Annotation	Chromosome	Start	End	Strand
ctg757-2.13-1	CHONDROITIN SYNTHASE	chr13	4078337	4084071	+

Gene Structure

More details in Jbrowse Sequence

CDS

ctg757-2.13-1

ATGGATGTGCTACGCAAAGTTTCAAGTAGGATTGATAGCTCACACGGAGCAGAAATCATTTTCAAAACCATGAACGATCGTAAAAGAAGTTTTGGTAACTTCCTAGGTGGCTTAATATTGGGGGTATGTCTTGTGTACCTAATATCGCAGACCTTTGTAAAACTCAAATGTTTCAAATCACACCACGTAGGTGGAGTTCAATACTACATCGACCGCAACCGGCCATCGACGACCGCCTACGAAAAACGTTTGATGTTCATTGGTGTGATGACAACGAGGCAGAATCTGAGATCGCGCGTAGTCGCGATTAATCGCACATGGGGGAAACTGGTTCCGGGAAAGATGCTCTTCTTCATTGGAGAAGGCGAACCCTATCTCGGGGACCTTCCAGTCGTGGTGTTGAACGACGTGTCAGACACTACCTATCCTCCACAAGGGAAATCCTTTGCGATGCTGAAGTACATGCACGACCATTACCTGGACCAGTTCGAGTGGTTCATGAGAGCAGACGATGACGTGTTCGTGAAGACCTATCACCTCGAGCGATTCCTACGCTCGTTTTCCAAACTCTTTCACCAAAACTACGTCGACGTCACCGGGCCTTTCGAAAAGTTCACGCATGCGCTAACAATACATCCTGTTAAGCAACCACAGAACCAGTATGGCCTTCACCGCCATTACAGCTTTAAGGGAATCTTGCAGCACACGACAAAGATCTCACGTCTAGAAAAAACAATCGCCGATATGGACAAACGACATTCTCAGACGAATCTAAGCAATGAAAGGGTTAAACAGCAGCAGTACAGTAAAATTACCACAGAGAACAATAACACGTATGCGGATGATGACGTCTGGGAATTTATTCGACATGGACAGGCGTATTCCATTACTCACTCGCTCGTTTCTCCCTTTGAGAAGATAATCACACGGGGAAGACATATCGATCTATCTGCTGCCATTGCACGTCTTAAAAACATTCAACCTAGGTTAAATGTTACACACCTCTGGGTTTACTCAAAAATAACCATTGGTTCAGGTCTGGAGCACTTACTTTATGAAAAGTTTCTGGTCAGACCGTATGCCACGAAACAACGTTTCAATGCAACGGAAATTGCTGAAGAATCGACGGAACTAGCTGTAGAATCGACGGAGTTAGCCGAAGGTATGACGGAACTAGATGAAGGTATGACGAAAAAAGCCGAAGGTATGACGAGAAAAGCCAAGAGTACGACTAAAAAAGCCGAAGATACGACGGAAAATGTCGAAGTCAGTCGTCAATGCGGCGTCATCTACATGATATTACCGCTGTACCGACGATCAATACAGTTCGCTAATTTCCTCCAGTGGGTAAATATCTCCGTGTCCGACTACGACAACGACGTGTTTCTCAGAGTCGTCATATACAGAGACAGAAATAACGAGTACCTGACTTCTCAAAGGTATGTGTTTGATGCGCTAGATAACGCCAGTGAAAGGCTCCACGTTGAAGTGTTTCCGATGGTGGGCCGTTTCGCCCGCGCGAGGGCGATCACGCAAGGGCTACAGGGTGTGCCGTCAGGCGGGTTGGTTCTTGCCATGGATGTCGACATACGCGTGACCGCAGGTTTTCTTCACAGGGTTTACCTCAACACAAAACTCAGCAGGCAGGTCTATTTTCCCATTATCTTCACCCAGTACGACCCCCGCACCTCGTGTCGCGGCAAGCCACGTTGTCGTGGTAACACGGCCGAGTTTCGGTTCGGCCAAGACGACGGCATCTGGCGCTCCTTCGGCTACGGCATTGTGAGCGTGTATAAAAGTGACATCATAAAAGTAGGCGGGTTTAATACTCTGATCAAAGGGTGGGGTAAGGAAGACGTGGACTTCTTAGACAAGTGTTTAAAAAACGGATTGCGGATCTTTCGGTCCGCGGACCCTGGGTTACTGCACGTTCATCATCGAAGAGTATGTGACGTCAGTCTGTCACGTGACCAATTCCGGATGTGCACGAATTCCCGCGAAGCCTTATACGGATCCCAAGCTACTTTAACAAATATTCTCCTCAATAATTTAGACATATAA

Transcript

ctg757-2.13-1

Protein

Gene family

Gene family	Subfamily
-	-

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF02434	Fringe	Fringe-like	Family	Interproscan
PF05679	CHGN	Chondroitin N-acetylgalactosaminyltransferase	Family	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR003378	Domain	Fringe-like, glycosyltransferase domain	Interproscan
IPR008428	Family	Chondroitin N-acetylgalactosaminyltransferase	Interproscan
IPR029044	Homologous_superfamily	Nucleotide-diphospho-sugar transferases	Interproscan
IPR051227	Family	Chondroitin sulfate glycosyltransferase	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR12369	CHONDROITIN SYNTHASE	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0008376	Molecular Function	acetylgalactosaminyltransferase activity	Interproscan
GO:0016020	Cellular Component	membrane	Interproscan
GO:0016757	Molecular Function	glycosyltransferase activity	Interproscan
GO:0030206	Biological Process	chondroitin sulfate biosynthetic process	Interproscan
GO:0032580	Cellular Component	Golgi cisterna membrane	Interproscan
GO:0047238	Molecular Function	glucuronosyl-N-acetylgalactosaminyl-proteoglycan 4-beta-N-acetylgalactosaminyltransferase activity	Interproscan

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID	Source
-	-	-	-	-	-

Expression pattern

1. Expression trend for ctg757-2.13-1 global RNA-seq network