Gene detail

Detailed information of ctg680-2.9-1 in Gigantopelta aegis Gene info

Gene ID	Annotation	Chromosome	Start	End	Strand
ctg680-2.9-1	VALYL-TRNA SYNTHETASES	chr10	5915595	5947662	+

Gene Structure

More details in Jbrowse Sequence

CDS

ctg680-2.9-1

ATGAGGTGTCACAGCAAGACAGGGCTGACTGCACATGTTGCCTTCATCATGGACTTTCTCAAGCAGCTGGGTTGGATTATCAACATCGAGAAATCTCGACTGGCTCCCACGCAGTCTCTACAGTTCATAGGCGCTTGGCTTCGACCCGACCTGGGCCTCGTTCAAGTTCCTTTAGACCGTTGGGAGAAGATCCAGACCATGATTGTCATAGCCCTCACCGCTCCAATGACCTTCCGCGGTTGGCAGAGTCTCCTGGGTCTCCTCACGTCTGCCCAGGATTTGACACTCAGAGGTCGTCTCCAGTTGCGGCGATTGCAGATGTTTCTCAACCCGGGTTTCCAATGTACTAGCCGACACATTGTCTCGGCCGTCGTCTCCACAGCCGACGGAGTGGATGCTCCATCCGGAAGCGTTTCGATGGGTGTGCGACAGACTTTGGACACCAAACATCGATCTTTTCGCCACACGATTCAACCATCAGCTGAGGGTTTACGTGTCTCCGGTGCCGGATTCCGAAGCTCTGGATCTCGACGCATTGGCCATCAGCTGGGAACAGATGGACGCGTACGCTTTTCCTCCACCAATCCTCCTTCCAAGGGTGCTTCAGAGGTTTCAGCTGTACCATTGTCGCCTGTTGCTCATTGCTCCGATGTGGCCATCCAGGATGTGGTATCCAGATCTAATACGTCTTGCCGATCCACATCCTTTACCGCTGCCAGACTGGGATCATCTGTTGCTGCATCCCACGTCAAGACTATACCATCCACGTCCGCAGTTGTTCCAACTGCACGCGTGGACTTTATCTCCAAGAGTTTGAGGAAGAAAGGTTTTTCTTCACAGTCTACAGCGGCCATTTTGAAAGCGCACAGATCATCTACTACTGCGGCTTACAACGTCAGATGGCTTTGCTTTCACCGATGGTGTGTTGGGAAAAAACTCAAACCTCAGACGATCCAGATACCTCGTCTTGCTTATTTTTTGCTGTATCTGCGGACCACTTTACGATTGAAGGGGTCTACCATCGCTGGGTACGTTTCGGTCATTGCTACTGTTCGTGATGTCACTACTGGAACGAAGTTATCGGGTATTCCTGAGATCCATAAGATGATCAAAGGGTTTCGCCTTGAAGATCAAGTACACCGGTTTCGGCCACCAAGATGGGACCTGAATTTGGTGTTACGAGCGTTATCGACCGCACCTTATGAGCCGATCGAGTCCTCTTCCCTGCAAGATTTGACACGGAAGACGGTGTTTTTACTCGGTTTCGCCACGGCTGCTCGTGTCTCAGAACTTCATGCTCTTGATGTAGATTTGGTACGTTTTCACCGAGATCGGCGTGCAGTCAACTTGGGGTTACTCATGAACTTTATTGCAAAGAATCAGTTACCAGACCAAGCGCCTCGCTCGTATGTTGTGCAGGCCCTCTCCTCTATCGTTGGTCCGGCGGACGTTGAGGACTTGGCGTTGTGCCCTGTTAGAGCCCTGCACCAGTACATCGAGAGGACCAGATCTTTTCGACAACATCGTAAAAGACTTTTCCTCTCCTGTAACCAGAGTCGGTTGAGGGATATTACCAAGAACACGGTGGCCACCTGGATCCGGTCTTCTATCCTGACCGCCTATCAGAAGGAGGGTTTACCTGCTCCGTCTGCTTCCAATCCGCATGAACTCCGTGCCTTGGCTGCCACGATGTCCCTGCATTGCAACACATCCATTCAGCACATCATCACTGGCTGTTTCTGGGCGACGGACTCCATCTTTGCCAACTATTATCTGAGGGATGTCTCCACAGAAGACAATGCCGATGAGGAGCCTTTTGTGATGGTACTTCCACCACCCAACGTGACCGGAACTCTCCATCTGGGCCATGCTTTGACGTGTGCCATTCAAGATGCACTCGTGCGATGGCATCGTATGCATGGCCGCCAGGCGCTGTGGGTTCCAGGCTGTGACCATGCTGGGATTGCCACACAGGTCGTGGTGGAGCGGAGACTATGGAAGGACCACAAGAAGACACGCCATGATATCGGCCGCAAACAGTTTGTCAAAGAAGTCTGGAAATGGAAAACTGAAAAAGGTGGGTTAATCTATGACCAGATGAAGAAACTAGGATGTTCCTTGGATTGGTCCAGAGAGGCATTTACCATGAACGAGGTACTGAATGTACCAGTAGAGGGCAGGACAGAGATTGCAGTTCCAGGATACAACAAAAAAGTAACATTTGGAATTCTGTCGTCATTTGCATATCCTGTAGAAAATACAAATGAGGAAGTTGTCGTGGCAACCACTCGCCTGGAGACAATGCTAGGTGACGTGGCCGTGGCCATACATCCGGCCGATGAGCGGTACGTTCACCTACACGGCCAATTTGTCCTTCACCCCATCGATGGGCGCCGCCTGCCCATCATCTGTGACGACTTTGTTGACCAGCAGTTTGGAACAGGAGCGGTGAAGATAACTCCCGCTCACGACTACACTGACTATGAAGTTGGTCTCCGGCACCAGTTATCTCCTCTGTCTGTTATTGACGATGGTGGAGACATGACAAATGTGGACAGTGCTTTTTGTGGCAAGAAACGATTCCTGGTCCGACACTTACTACAAAAAGCATTGAAAGAGAAGAACGTGTTCCGTGGGGAGGAGGAACACAGTCTGACTGTGCCTGTATGCAGTCGGTCTGGTGACATAGTGGAACCCCGTCTCAAGGATCAGTGGTTTGTCAGCTGTAACAAGATGGCTGAGCAAGCGGCCCAGGCTGTCACAGACGGCAAGCTTACATTGCTGCCTAACAACCATACAAAGATCTGGCTTGATTGGCTCAACAATATCAGAGACTGGTGCATATCTCGACAGCTGTGGTGGGGTCACCAGATTCCTGCCTACAGGGTGCTCAACATACAAGACAAGGTGGTGTGGGTCAGTGGTAGGACACAAGAGGAAGCAGTGAACAAGGCGGCAGACACTCTCGGAATTCCAGCCAGTCAAGTTGAACTACAGCAAGGTCGGATATTATAAAGAGACCATTACAAGAGTAGTGTAAGAAATATGTCAGATGACTTCATATAATCATTATTCTTATTAGGAAATGGAAATGTTTTATTTAATGATGCACTCAACACATTTTATTTACGGTTATATGGCATTAGACATATGGTTAAGGACCACACAGATACTGAGAGAGGAAACCCGCTGTCGCCACTTCATGAGCTACTCATTTCGATTTGCAGCAAGGGATCTTTTATATGCACCATCCCACAGACAATGGCAACTGGATGTCAAACATTTGGCAATTTTTACACTTTTAATCCTGCTACCGTCCATTAGTAGCAAAGGATCTTTTATTTCTCTTTGTTTAGACTTAAGGTACTTGGGAAATTCCTCCAAAACACTTGGGACATTAATATATGGTAAACACTGTCACTGGGGTTATCTTAAGGAACCCAGGACAGTAAT

Transcript

ctg680-2.9-1

Protein

Gene family

Gene family	Subfamily
-	-

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF00133	tRNA-synt_1	tRNA synthetases class I (I, L, M and V)	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR001412	Conserved_site	Aminoacyl-tRNA synthetase, class I, conserved site	Interproscan
IPR002300	Domain	Aminoacyl-tRNA synthetase, class Ia	Interproscan
IPR002303	Family	Valine-tRNA ligase	Interproscan
IPR009008	Homologous_superfamily	Valyl/Leucyl/Isoleucyl-tRNA synthetase, editing domain	Interproscan
IPR010998	Homologous_superfamily	Integrase/recombinase, N-terminal	Interproscan
IPR011010	Homologous_superfamily	DNA breaking-rejoining enzyme, catalytic core	Interproscan
IPR013762	Homologous_superfamily	Integrase-like, catalytic domain superfamily	Interproscan
IPR014729	Homologous_superfamily	Rossmann-like alpha/beta/alpha sandwich fold	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR11946	VALYL-TRNA SYNTHETASES	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0000166	Molecular Function	nucleotide binding	Interproscan
GO:0002161	Molecular Function	aminoacyl-tRNA editing activity	Interproscan
GO:0003677	Molecular Function	DNA binding	Interproscan
GO:0004812	Molecular Function	aminoacyl-tRNA ligase activity	Interproscan
GO:0004832	Molecular Function	valine-tRNA ligase activity	Interproscan
GO:0005524	Molecular Function	ATP binding	Interproscan
GO:0005829	Cellular Component	cytosol	Interproscan
GO:0006310	Biological Process	DNA recombination	Interproscan
GO:0006418	Biological Process	tRNA aminoacylation for protein translation	Interproscan
GO:0006438	Biological Process	valyl-tRNA aminoacylation	Interproscan
GO:0015074	Biological Process	DNA integration	Interproscan

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID	Source
-	-	-	-	-	-

Expression pattern

1. Expression trend for ctg680-2.9-1 global RNA-seq network