Gene detail

Detailed information of ctg675-3.5-1 in Gigantopelta aegis Gene info

Gene ID	Annotation	Chromosome	Start	End	Strand
ctg675-3.5-1	PROTEIN ODR-4 HOMOLOG	chr10	81065968	81088318	+

Gene Structure

More details in Jbrowse Sequence

CDS

ctg675-3.5-1

CTTTGATAGTGAACGTACACTTCCGGTTAGAGTTGTATCGCGTTATGTGTAAACAGTTGGTTAAATATTTTGTTTAATATGGGAAGATCAGTCCTAGCTGATGAGTGTATTCAGCAATATATTGAACAATTAATCAAAACTGGCCAGTGGTACACAGGTCTTGTTATAGGCCAGCAAACTGCAGCCGGCAAGGATTACATTGTTCGACTGGTGCGGACACCGGACCCAGTTGAAGATGAGGCAAGCGAGGAGGAGGATGGTGAAGAGGTTGAACCAAGGAGACAGCGCAGTGAGTCGGGTCGTCCTGGCAGTCTGGAGCTGGCCGACGAGAAGTGGGCCGCGACACACACAAAACAGGTGATCCGTATGTTGCCTGGAGGACTCGATATTATTGGAATTTTTGCTCTAGCTCCACCAGACATGATGTCAAACGCACAGACCAGACTAAGACAAATTTTGTTTGCAGTTCACAAGAACCTGAGTAAGAATCTGCTAGCGACACGAGATGACGAGGTGACAGATCGACTGGTGCTGCAGATCTGTTCTGTGACCAGGAAGTATCCTTTCAGTTTGGTCTCAGCTAATGAAGAACTTGAGTTCAGTTTAAATGTAAGCATCCTTGACTTTAGCAGAGTAACATGCAGAACGTTTGATGTGGCTGACAACAAGAGCTCGGCTCGTCCTGCAGAGTGGCGCTATCAGTCACACCTGGACCGATGGACACGACTTAGCACACGCCTCGCTATCAACATCTCCATTCCAATCACAGAGAAAATCAAGACACATGTTATGCTGAAACAAATACAGTTAGGTATTTCTTCTTTCTGCACTTCCCTGTCAAAGGCCCGGATGCTAATTGACAACGTTGTTCGAGACCCCAGTGAAACACTGGAACAGTCCGAAACAAGGAAAGGAAAAGGCAAAGATCGCAGTTCATCAGCTCCGCAGAATTTAAATGTTGTTGTTTTAGTGCCTTTGAGTACTGATGATAGCGGTGAGCCATCGGTGTCTAAGCTCAAGTCTCTGATTGCCATAAAAGGACAAGTAGTGGGACGTGCGTTCGTCAACTTCCGTGCCACAGTTGCAGATGCTACTGAGGCTTTGAAGACGGACATCGTGCGAAGTTTGACGTCGAGGTGTGAACTTCTCTGTGAAGATATTGATGTGATAGAAGCAGACTCAAGTAAGGAACTGTACAACACCCCGGTGCGGGTGTTTGCTCACCTTCCCGCTTCAACTCTCCACTTCTCAGACTACATGTTCCAAGACGAAAAGACGAGTGAGGTTGTCGACAGATTTAAAGAACTACTAGACATTGACGTAGAAGAGAAGGATATCGAGTTCCACTGCGAACGACCCGGTGGTAGGACGACGCGGAAGACGGTGTTTTTACTCGGTTTCGCCACGGCTGCCCGTGTCTCAGAACTCCATGCTCTTGATGTAGACTTGGTACGTTTTCACCGAGATCGGCGTGCAGTCAACTTGGGGTTACTCATGAACTTTGTTGCAAAGAATCAGTTACCAGACCAAGCGCCTCGTTCGTATGCTGTGCAGGCCCTCTCCTCTATCGTTGGTCCAGCGGACGTTGAGGACTTGGCGTTGTGCCCTGTTAGAGCCCTGCACCAGTACATCGAGAGGACCAGATCTTTTCGACAACATCGCAAAAGACTTTTCCTCTCCTGTAACCAGAGTCGGGTGAGGGATCTTACCAAGAACACGGTGGCCACCTGGATCCGGTCTTCTATCCTGACCGCCTATCAGAAGGAGGGTTTACCTGCTCCGTCTGCTTCTAATCCGCATGAACTCCGTGCCTTGGCTGCCACAATGTCCCTGCACTGCAACACACCCATTCAGCACATTATCACTGGTTGGTTCTGGGCTACCGACTCCATCTTCGCCAACTATTATCTGAGGGATGTCTCCACAGAAGACGTTGAGGGGTTCCATCATCTGGGTCCGGTTGTTGCTGCACAGACTCTGTTGAATACAAGCCGTCCTCGTCGCCGTTGA

Transcript

ctg675-3.5-1

Protein

Gene family

Gene family	Subfamily
-	-

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF14778	ODR4-like	Odorant response abnormal 4-like	Family	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR011010	Homologous_superfamily	DNA breaking-rejoining enzyme, catalytic core	Interproscan
IPR013762	Homologous_superfamily	Integrase-like, catalytic domain superfamily	Interproscan
IPR029454	Family	ODR-4-like	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR33966	PROTEIN ODR-4 HOMOLOG	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0003677	Molecular Function	DNA binding	Interproscan
GO:0006310	Biological Process	DNA recombination	Interproscan
GO:0008104	Biological Process	protein localization	Interproscan
GO:0012505	Cellular Component	endomembrane system	Interproscan
GO:0015074	Biological Process	DNA integration	Interproscan

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID	Source
-	-	-	-	-	-

Expression pattern

1. Expression trend for ctg675-3.5-1 global RNA-seq network