Gene detail

Detailed information of ctg673-1.6-1 in Gigantopelta aegis Gene info

Gene ID	Annotation	Chromosome	Start	End	Strand
ctg673-1.6-1	ANKYRIN REPEAT AND EF-HAND DOMAIN-CONTAINING PROTEIN 1	chr4	86933768	86946320	-

Gene Structure

More details in Jbrowse Sequence

CDS

ctg673-1.6-1

ATGATCGCTAATGGCATCCCTCACTTGATCAACTACAACGACCAGAACGATGGCACGACGGCGCTGAGCGTTGCCGCCTGCATCAACGACGACGAAATGATCGAGTTTCTTCTCGACATGGGGGCTCACCCAGATGTGATGGATTTCAAGGGAAGGACAGCTGCCATGAGGGCCGCGGAATATGGTCATGTGCACTGTTTAGAAAAATTAACAAAAGCTGGAGCCAATATGAAGCTTTTTGACTTGGAAGGCAAAGGTATAATCTTCTACTGTATAACACCCACCCAGCGCCATGCCAGGTGTCTGGAGATGGCAGTGAACAATGGAGCGGAAGTGAACAATGTCTCCAAAGATGGGTGGCCGGTGTTTCTCATCGCCTGTGAAAGTGCTGTGGAGAACAAGAGCATGTGTCTCCTGCTGCTGGAGAAAGGAGCCGACCCCAATTTAAAACATGAAAAAACATCACGTACTTCTTTAATGGCTGCTGCTGAGAGTGGTGGTGTGGATGTTGCCAAGGCGATCCTTGAGGCTGGGGCTAACGTCAATGCTCTGGATTCACGGAAAAACCATGCAGCACACTATGCAGCAAAGGGAGGTCACTTTGAGGTACTTGTCATGATGGCAGGATATGGAGCAGACTTTAACCAGACCAACGCAGAGGGAAACACCCCCATTCATTTGGCAGCCATGAATGGAAGTGGACCTTGCTGCAAATATCTTTCACAAAGAGGTTGCAATCCAAAACCTAAGAATAATGACGGAAATCCAGCCAAAAATATAGCAAAAGATGCTGGCAACAAAGAAGCTGCTAAAGAGTGTAGAAAAGCTGAGAAATCATTTGCTAAAGTTTTAAAAAACGGTGAACCTTGGGTCATACACCTGTATGACTGGTCATGGGCACGCAAGAACAAATTACTGGAATTGTTTAAGAAATATGACCCTGATGAAACTGGAACTATTCCCAAGGATGACTTCCTGGAAACCATGATGGACATGAAGGCTCCTGCAGACCAGGGAGATCTGGCCAAAGTCATCGTTCTCTACGACAAAAACAAAGAAGGCAAGATAGATTACAATGACTATTTCAATGGAAAGAAATATGTGAACAAAAATTTTCTTTTAAGTGCATTTGAAGGGAAAAAGAAGAAGAAGAAAGGTGGCAAAAAGGGCAAAAAGAAGGGCAAGTTCAAGCTGGTGATGCCGATATGTATACAAGACGAAGGTCCTCGGACCTATGGAGGTGGTCCTCCTGCCATGTACATTCCTCAGAATATCCACTTCACAGACACGCGGCGGTTTGACCGAGACGCTCCGCCGAAACATCCTCTCCAGGACGACTCAGCCTGGTATTTACAGCAGCCAGACAAGACGTATGTGAACATCAACGAGGCGGCTAAGATGGGAGATTTCGACTCCCTGAAGAGCGCATTTTCTAAAGGTGTGTGTGTGGACACGCGAGATAAGTTCTACAAAACTCCACTGATGGTGGCCTGTGCTACTGGGCATATCAACATGGCAAAATTCCTGGTAGATAATGGGGAGATACAACATGACTTTACGATCAGTTCGTTCTATGCAATAGTTCTTTGTAAGCATGTTCGTTGAATGCTTGATATTGTGGAAATGCTTCTCAACTTTGGTGCCGAGATTGATTCCTCGGCACTGGGAGGTGGAACCCCTCTGAACCGAGCCATTGAGAGTTCACGCGAGTCTGTCGTACAGTACCTCATTAACAGGGGAGCAAGACTACAAACTGAAAACAAGAAAGGACAAAATCCTATGGACCTCGCACAAGCTTGGGCTGACCCCCGGTGCATGGAAGTCGTGCAGAAGAAGTGGGACACCCTGCCTCCTCCCGGTGACAAGAAGGGAAAGAAAGGAGGAAAGAAAAGTGCAAGGAAGAAGTCATCAAGACCCGTATCAGCCCCAGGGGTCACTGATATAGCTGCTGCCCAGCATCAGGCTTTCTTAAGACCACTAGAGGACACGATACACCAGCGGAAGGGTTCCATCCTTCGAGCGGCGTCGGCTCTGGCTGGAGGTATAGACGAGAAGGAGGATATCACTTACACCCCGCTGAAGGCGTGGACAAAACAACCGACCACCGATGAGTTGATCCAAGAGAGACAAGTCAAGCGGGAACGCTTTGGCTGGGAGGTGGACTTTGACGATTTCGAAATGCCGTTTAAAAAGAATGTTACCAAAAAACTGGAAATGTTTAATGCTTTAGAAGAAGAATAA

Transcript

ctg673-1.6-1

Protein

Gene family

Gene family	Subfamily
-	-

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF12796	Ank_2	Ankyrin repeats (3 copies)	Repeat	Interproscan
PF13499	EF-hand_7	EF-hand domain pair	Domain	Interproscan
PF13637	Ank_4	Ankyrin repeats (many copies)	Repeat	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR002048	Domain	EF-hand domain	Interproscan
IPR002110	Repeat	Ankyrin repeat	Interproscan
IPR011992	Homologous_superfamily	EF-hand domain pair	Interproscan
IPR018247	Binding_site	EF-Hand 1, calcium-binding site	Interproscan
IPR036770	Homologous_superfamily	Ankyrin repeat-containing domain superfamily	Interproscan
IPR052801	Family	Ankyrin Repeat and EF-hand Domain-containing	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR24127	ANKYRIN REPEAT AND EF-HAND DOMAIN-CONTAINING PROTEIN 1	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0005509	Molecular Function	calcium ion binding	Interproscan
GO:0005515	Molecular Function	protein binding	Interproscan

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID	Source
-	-	-	-	-	-

Expression pattern

1. Expression trend for ctg673-1.6-1 global RNA-seq network