Gene ID | Annotation | Chromosome | Start | End | Strand |
---|---|---|---|---|---|
ctg672-2.8-1 | ATP-DEPENDENT RNA HELICASE | chr14 | 48607498 | 48628610 | - |
CDS | |||||
ctg672-2.8-1 | |||||
Transcript |
ctg672-2.8-1 |
Protein |
ctg672-2.8-1 |
Gene family | Subfamily |
---|---|
- | - |
Pfam accession | Pfam name | Description | Type | Source |
---|---|---|---|---|
PF00271 | Helicase_C | Helicase conserved C-terminal domain | Domain | Interproscan |
PF04408 | HA2_N | Helicase associated domain (HA2), winged-helix | Domain | Interproscan |
InterPro term | Type | Description | Source |
---|---|---|---|
IPR001650 | Domain | Helicase, C-terminal domain-like | Interproscan |
IPR002464 | Conserved_site | DNA/RNA helicase, ATP-dependent, DEAH-box type, conserved site | Interproscan |
IPR007502 | Domain | Helicase-associated domain | Interproscan |
IPR014001 | Domain | Helicase superfamily 1/2, ATP-binding domain | Interproscan |
IPR027417 | Homologous_superfamily | P-loop containing nucleoside triphosphate hydrolase | Interproscan |
IPR048333 | Domain | Helicase associated domain (HA2), winged-helix domain | Interproscan |
PANTHER term | Description | Source |
---|---|---|
PTHR18934 | ATP-DEPENDENT RNA HELICASE | Interproscan |
GO terms | Category | Description | Source |
---|---|---|---|
GO:0000398 | Biological Process | mRNA splicing, via spliceosome | Interproscan |
GO:0003723 | Molecular Function | RNA binding | Interproscan |
GO:0004386 | Molecular Function | helicase activity | Interproscan |
GO:0005622 | Cellular Component | intracellular anatomical structure | Interproscan |
GO:0005681 | Cellular Component | spliceosomal complex | Interproscan |
GO:0034458 | Molecular Function | 3'-5' RNA helicase activity | Interproscan |
KO | Enzyme | Enzyme ID | pathway | mapID | Source |
---|---|---|---|---|---|
- | - | - | - | - | - |
1. Expression trend for ctg672-2.8-1 global RNA-seq network |