Gene detail

Detailed information of ctg670-5.13-1 in Gigantopelta aegis Gene info

Gene ID	Annotation	Chromosome	Start	End	Strand
ctg670-5.13-1	EUKARYOTIC TRANSLATION INITIATION FACTOR 3	chr8	47379172	47412519	+

Gene Structure

More details in Jbrowse Sequence

CDS

ctg670-5.13-1

ATGGAATACTCTTCAAGAGGGGTGAAAGCCTCCAAATACAACCCTTATGCATTCAACTACTCCATTCCTCAGGAATATGACATGCACACAGGGGACCCCCGGTTGGACCAGGAGTACGAGCAGCGTTATCAGCAGACATCATACATCGTGCCGGAAGTGATCAAAAACTTCCTCGTTCAGTTCCAGAAGGTGATCAATGAACAGAACCTGTTAGAGATTCAGAACGCTTATGAAAATGGATTTAATAAGCTGACGGACAGATTCTTCAAGAATTCACCCTGGCCAGAAGCTGAACATGTTGCACCAATTGTTAACAATGACCCAATGTTTGTGATTCTATACAAGGAACTCTACTATAGACACATATACGCTAGAGTTACGAATGGACCCAGTCTGGAGCAGAGGTTTGAGTCATACTACAACTACTGCAATCTGTTCAACTACATACTGAATGCAGAGTGTCCTGTTGGTCTGGAACTGCCAAACCAGTGGCTGTGGGACATCATTGATGAATTTATTTATCAGTTCCAGTCTTTCAGCATCTTTCGCTGCAAGTTGAGCAAGAAGAGTGATGATGAAATTGAGTTCCTCAAGTCAAACCCTAAGATTTGGAATGTGCACAGCGTGCTTAATGTTCTGCATTCGTTGGTGGAGAAGTCGAATATCAACAAACAGTTGGAGGTTTACATAAGTGGAGGTGACGCGGACAGCGTGGCAGGCGAGTTCGGCCAGCACTCTCTCTACAAGATGCTCGGCTACTTCAGTCTGATCGGACTGCTGCGGCTCCACTCGCTGCTCGGGGATTACTACCAGGCCCTCAAGGTCCTCGAGAACATTGACTTCAACAAGAAGAATCTGTACTCGCGTGTCCCGGCATGCCAGATAACAACATTTTACTTTGTCGGCTTCGCCTACATGATGATGCGGAGGTACCAGGATGCCATTCGGACATTCTCCAACATTTTGCTGTATATACAGCGCACTAAACAGATGTTCCAGAACAAGTCTCAGCTATATGACCAGATTTCCAAGCAGAATGACAAAATGTACACCCTGTTGGCTATATGTCTGGTTTTGCACCCCATGAGGATTGACGAGAGTGTTCACTCACAACTCCGTGAAAAATTTGCCGACAAGATGCTGAGGATGCAGAAAGGAGATTCTGTCGAATTTGAGACCTCTTTCTCATTTGCTTGTCCAAAATTCCTGTCACCAGTTGCACCAAATTATGACACTGTGGGAGCCGGTTTTCATAAGGAACCATTTCAACTCCAGCTGAAGGTTTTCCTAGAAGAGGTGACCCAGCAAATTTTAATACCAACAATTCGGAGTTATTTGAAGCTGTACACAACTCTCCCAATAGCGAAACTCGCCACTTTCATGGACATGAGTGAGGAAGAGCTGCGGACACACTTGATGTGTTTTAAGCATAAAATGAAGAACATGGTCTGGACGAAAGGCACCAGTGGTCTAGATGGGGAATTTCAGTCGGCATCTGAAGTGGACTTCTACATAGACAAGGATATGATCCATATAGCTGATACAAAGGTGGCTCGAAGATATGGTGATTTCTTCATCAGACAGATTCATAAATTTGAAGAGATAACTAGGAATTTGAAAGTACTGTGATGGGTCAGAGTACAGAACATTTGATGCAGTAGAATTTGACTAACATTGACATTCACAAACAGTTCAGATATATTGAAGAAGAAAAAACAGATCTGTGGCAGTAACTAGACAATGAAAATACTTTTAAAAGGATAAAATTGTACAAGAAATCAAACTTATTTGGAATAAATCTTAATATGATTGGATTTTTTGTGTGTGTTTCTTCTGGTCTTTTTAATCAAAGCAAAATGTATGAACTTCAGAGGATGGGTGCTACAGGTGTGCATTATTTCAGGAACATTGTCACACATTGGTATAGTCTGGAATACTGTTGGTGCCCATTAACCTCGCCACTCTTCCATGTTGTACACATTGGTAGAGTCTGGAATACTGTAGGTGCCTATTAACCTCGCCACTCTTCCATGTTGTACACATCGGTACATTTTGGAATACTGTAGGTGCCTATTAACCTCGCTACTCTTCCATGTTGTACACATTGGTAGAGTCTGGAATACTGTAGGTGCCTATTAACCTCGCCACTCTTCCATGTTGTACACATCGGTACATTTTGGAATACTGTAGGTGCCTATTAACCTCGC

Transcript

ctg670-5.13-1

Protein

Gene family

Gene family	Subfamily
-	-

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF10255	Paf67	RNA polymerase I-associated factor PAF67	Repeat	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR000717	Domain	Proteasome component (PCI) domain	Interproscan
IPR011990	Homologous_superfamily	Tetratricopeptide-like helical domain superfamily	Interproscan
IPR019382	Family	Translation initiation factor 3 complex subunit L	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR13242	EUKARYOTIC TRANSLATION INITIATION FACTOR 3	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0003743	Molecular Function	translation initiation factor activity	Interproscan
GO:0005515	Molecular Function	protein binding	Interproscan
GO:0005737	Cellular Component	cytoplasm	Interproscan
GO:0005852	Cellular Component	eukaryotic translation initiation factor 3 complex	Interproscan
GO:0006413	Biological Process	translational initiation	Interproscan

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID	Source
-	-	-	-	-	-

Expression pattern

1. Expression trend for ctg670-5.13-1 global RNA-seq network