Gene detail

Detailed information of ctg67-18.3-1 in Gigantopelta aegis Gene info

Gene ID	Annotation	Chromosome	Start	End	Strand
ctg67-18.3-1	TOLL-INTERACTING PROTEIN	chr4	68860287	68875069	-

Gene Structure

More details in Jbrowse Sequence

CDS

ctg67-18.3-1

TATTCCCCCATTACACAGACCCAAATCAAAACAAATCAAGATGTCTGATCCTACTACTACTACGAATGAAACTAATTCGGCTCCTTCAAGTCGACGAGACAGGGTAATGGTTGGAGAACTTCCCGGTGACTTCCTTCGCTTCTCGGGACAGAATCAACAGAACATGGAAGATGCAAGAATAGCACAGATATTGCAGGCACAGCAACAGGCCGGCGTGCACATGGCCCACTCCAACATTGCCGGTCGTCTCAGCATCACAATAGCAGAGGCAAAGCTAACCAAGAACTACGGACTTACAAAGATGGATCCATACTGCAGGGTCAGATTGGGCCACTCGGTATTTGAGACGCCCACAGCTTACAACGGGGCAAAGAACCCGCACTGGAACAAAGTCGTTCAGATACTTCTCCCCAAGGGTGTTGATTCCCTGTACATTGAAATTTTTGATGAGCGGTCGTTCACAATGGATGATAGAATTGCCTGGGCTCACATAACTATTTCTGAGGCTGCCCTGTCTGGTGATACCACAGACAACTGGTTTCCTCTCAGTGGTCGTCAAGGAGATGAAAAGGAAGGGATGATCAACATCATCATGTCATTGACACCTGCAACTGATATACCAATGTCCTCTTTCGTACAATATGGTGGTGCCCCGATGATAATGCCGATGTACTACCCTGCACCACAGCCTGTTGTTGTTGGCGGAGTGCCTCAAGTAGGGGTGTACTCCCAGATGGCGCAACAGCCGCCTGGTGGAATGTACCCACAACAACAGAGGCCGAGTGGTCCGCTCTACACTGACGAAGATCTCAAACAGGTCAAGGACATGTTCCCAAACATGGATGAAGAAGCCATTAAAACTGTTTTTGAAGCTAACCGTGGAAACAAAGACAGTACAGTTAATTCCTTACTCGCCATGAATGCAGACTGAGCGGTTACACTGTACGCATCATGTTCTACTTAAAGACTTAGAACTATACAAAGATGTTGTGACAAAATATAATTGTCAATATTCCATTGAATATGGACAGATTATTACTATTCCAATAAATATATACTGATAAATATAATCAATGTTATCCATTTAATCTTGGGACTTTGTCGCCACTGCTCATTATTTATAATATCTTCAATTATGAGATTCAAATTGCTACATGATTTAACTTAAAATATTTTTGCTGTTATGTTTTTACATTTGTATGCGATGATCTGGATAGAAATCTAAATGTTTATTGATATGTGGGTCCTTCTGTAAAACTGGTACCTTCAAAGACCGGAATGTATTACAATGGCTTTTATTCAAGTCAGTTGGTCACTTGTTCAGCACAAGGTCGGAAATCATGCTTTGACGAAATATAAAAATGTGTAGGCATAATTTACGAAATAAAAACCCAGATGTAACGAAGCTAATTCAAGGACATGCAGTGTTTTTTTTTTTTTAATATTCTAATTTTTGTGGTGGTAATTTTTGACAAGAATGCATGTATTAATATGCATGCTGTGGTACTTCCAATGAATTGAACCATTTAGCACAGTAAATTCCTATACCAACTTGTGCTAAAACTGTTCATAGCACGAGTGGAAACCACTGGTTACACACAGAAGCCCAGCGTGACTGCAGATTCAGTCAAAACCAAGCCAGATGAATGACAAAACAGAACATAAATTGTAAGATCTATTCTGTATTTACAGTAATGTTTTAGGAAATTTGGTTCTTCTAGAATTAATGGTAAATAACAAAACAATGATGTCTGAATTCATATTTTTTTGGTGTGTGTTCCAATCTGGAATATTTTAGGTGGTATAGTAACAAAATTATTACTTAATTGTGTATTCAACTGTCAAAACCTTTCCATTTTCAAAGGACTCATCCATTGATTGATAAACAAGTTGAAACCAAGTTTGACATTAAATAAAAAAAGATGTTTACATTAATATCTACTGTGGACTTCTTTGCCGACATTATCATGTGAAGAATATTTCATTTGTAAGAAGTTCTTTTAAATGAAGTTACGTGAATTATGAAATATAATTTTCCGTAACGATAAAAAGTAATTACTATTGCATTGTGATAGAAACTTACTGTTATAAGTATGTTGCAAGTGTTTGTGAAATTGTGACTCACAAAACGTCCTTTCTTGCTATTAAAATGTTTTAACGACACCGAAACAACTTTTTAATTTTATTTTAGTGCTTGTGAAATTGTGACTCACAAAACGTCCTTTCTTGCTATTAAAATGTTTTAATGACACAGAAACAACTTTTTTTATTTTATTTTAGTGCT

Transcript

ctg67-18.3-1

Protein

Gene family

Gene family	Subfamily
Ubiquitin Family	UBD\|Alpha-Helix\|CUE

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF00168	C2	C2 domain	Domain	Interproscan
PF02845	CUE	CUE domain	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR000008	Domain	C2 domain	Interproscan
IPR003892	Domain	Ubiquitin system component CUE	Interproscan
IPR009060	Homologous_superfamily	UBA-like superfamily	Interproscan
IPR035892	Homologous_superfamily	C2 domain superfamily	Interproscan
IPR037301	Domain	Toll-interacting protein, C2 domain	Interproscan
IPR041799	Domain	Toll-interacting protein, CUE domain	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR16461	TOLL-INTERACTING PROTEIN	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0005515	Molecular Function	protein binding	Interproscan
GO:0005737	Cellular Component	cytoplasm	Interproscan
GO:0006511	Biological Process	ubiquitin-dependent protein catabolic process	Interproscan
GO:0031624	Molecular Function	ubiquitin conjugating enzyme binding	Interproscan
GO:0043130	Molecular Function	ubiquitin binding	Interproscan

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID	Source
-	-	-	-	-	-

Expression pattern

1. Expression trend for ctg67-18.3-1 global RNA-seq network