Gene detail

Detailed information of ctg661-1.3-1 in Gigantopelta aegis Gene info

Gene ID	Annotation	Chromosome	Start	End	Strand
ctg661-1.3-1	ANKYRIN REPEAT FAMILY PROTEIN	chr9	42608388	42634140	+

Gene Structure

More details in Jbrowse Sequence

CDS

ctg661-1.3-1

GTGTTGATTCTTGAAAACTAATCTACACCAAGAACAATAGTGTGACGTCACAGGTTAATGATGTAAACACATAACGTGATAAATTCTGGAGTTTTGGAGGAAAACAAATCTATGACAAGATGACTGATGAACTTCAATTAACATCTGAGACTTCCCCACCAAATGTAAGGGAGACAAGCCCAGCGGATGCTGCGCGTGAGATCCTCACTAAATATGGTCCTAAGTTTTCTATGAAGAATGGAAACACGTTGCTTCATATCTGTGCTGACAAATCTCCAACATTTATCTATGTGCTAGCCAGTGGTGGGGTTCCAGTCAACATACAGAACAATGAAGGAAATACTCCTCTTCATCTTGCAATCCAGAAAGATAGCTATGAAGTTGTGCAGGCTTTATTACAGTGTGGTGCTGATCTGTCTCTCAGAAACAAGTTGGGTCTGACTCCAATAGATATGTCAAATGATGTATACAGAGAGCTGCTAAAGAGATATCAGCCGGGTATAGTGATGGCCGTTCTGAATGGCAAACACCAAACACTTGAAAGATTTTGTAGAAACAACTGGATGAATTTCGAAACCATTGTCAAGAAAAACAAAACTTTGATGCAACTTGCAATGGAGGAGGCTGAGAAAGATAAAAATATTCTGGATTGTTGCCGAGTTTTACATGACTATCGATCTACCAGTGAAGTGACCCATGCTGTTTTGTCTCAGGATGTAGAGAATCTCCGTTTCTTGTTGAGCACTCTCGGAGATTACTCAGTCAATGTTCGTCTTCGAGATCGGCTTGGAAAAACTCTTCTATCCCATGCTGTGGAAAACAATAATTTACAAATCAGTAAAATGCTGGTTGATGCAGGCGCACGAATAAAGGACATTCGTGTCAAGGAACAAGAAAAGGACAGTGCCACAGTTCCATTATTCCACAAGGCTCTGAGGAAAGGAGCAGATGAAGACATTGCCAAATACTTGTTTTCTGTCCAGGATCCCACCGAGTTACTGGAAAAAGATGCAAATGGCAACACTGCCATTTTACGAGCAGTACAGGAACGGTGTTCAGCCACTTTAATTACCTGGCTGCTAGAAGTCCAAAATGGCAAATGTTTAACACACAGAAATAAGGATGGTTTAACACCTGTGGAACTGGCATCTCATCTACAACATACAGAATTAGTGCTAGCAATTAACCAATTCATACTCAAAGGCAATAAGGATCTTGATCTGCTACAGTTGCCGGTTCATTTCTATGGAAACCAGAACCTCCAACTGACAGATGAGACTTGTGGTAAATCTCTTGTGGAGCTTGTCAAGGACAGCAACAACAAAGAGAATTTAGTTGCACTGGAGCGCTACTCGGACATTGAGGAGAGGGGTGTGTCTTTGTTTAATGCTGCTGCTACTGATGATCTTGACCTGGTGCAGAAACTAAACATGGGGAACTTCCAAGACAAAAATGGCTTCACAGCACTGCACAGAGCTATTGTGTTTAACCAGCAGCAAATTGCAGAAAACCTTGTCTTAACAAGACCTGGTCTTAAATCCATCCCCGACAATTGCAATCGCTACCCACTTCATTATGCATGCCTGTTACCCGATGAACAACTGGTTTTCTTTGCAAAACTTCTGTTGGAAAAAAATCCACAAGATATTGAAAAACGAGTAGACAAGGACGGCCGCTATCCTGTCGACTACAAGCGTCTTCGTGGGTCCTCTGAAGGTCTCCAGCTTTTGTATGATGCCAGGACACTGGATGCATATGGAAAGAGAGGATCACCTTTAGGTCCATGGCCAGATGGTGCAATGACCAGTCCACCTCAGGAAGAATGAAACAGATTTGTTATCTTACAATGATAAACCATCAATTCTTGTGGTGTCCCTGAGAAAGAAACTTGTCTTGTCAACAGAAATTCTCAAAAATGTTCCAAGATCTTCCAAACATTGCATATAATATCAAACCTGTGGTGATCTGCAATTCATATTCTTTCCATTACCAGTGTACTGTGTATATCTGTTGTAGATCAGTATTCTTGCAACAGTATTTTTATTAATTAAATTTTTTTTTTATTCTCATGAATTACAGTGGGGATTAAGTTTTCATGAACAATGTATGTTAACACTCAGGTGCATAATCCACGCAATAATAAAATAAGAACGACACAGGACTTGGGGATGATCCTAATCCACGTGTAGTTGACTGTAGGTTTATGCTAGGGTCAGACTACCAACTGCCAGCACAAAGTTGGCCAGCACGACAGTTGCCTTGTAATTTCTCCAACTCCCAATGGATGCAAACAGATTAACAATTAATGGGTTATACGATGAGAATAGAGTTGTAAGAGCACTCAGACTAGCAACTAGACAGGTCGTAGAAGTCGTGACAGCAGAAAGTTGGCCAACTTTCTACTGGCAATTGGTAGTCTGAACCTTGAGATTTGATAACATTGGGGGGGGGGGGG

Transcript

ctg661-1.3-1

Protein

Gene family

Gene family	Subfamily
-	-

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF12796	Ank_2	Ankyrin repeats (3 copies)	Repeat	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR002110	Repeat	Ankyrin repeat	Interproscan
IPR036770	Homologous_superfamily	Ankyrin repeat-containing domain superfamily	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR24203	ANKYRIN REPEAT FAMILY PROTEIN	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0005515	Molecular Function	protein binding	Interproscan
GO:0030941	Molecular Function	chloroplast targeting sequence binding	Interproscan
GO:0031359	Cellular Component	obsolete integral component of chloroplast outer membrane	Interproscan
GO:0045036	Biological Process	protein targeting to chloroplast	Interproscan

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID	Source
-	-	-	-	-	-

Expression pattern

1. Expression trend for ctg661-1.3-1 global RNA-seq network