Gene detail

Detailed information of ctg560-3.15-1 in Gigantopelta aegis Gene info

Gene ID	Annotation	Chromosome	Start	End	Strand
ctg560-3.15-1	EUKARYOTIC TRANSLATION INITIATION FACTOR 3 SUBUNIT 7	chr8	67328787	67349581	+

Gene Structure

More details in Jbrowse Sequence

CDS

ctg560-3.15-1

ATGGTGGCCACAGACAGTACCACCGCAGCAGCTTATATCAACTGTCAGGGCGGAACCCACTCCAGCAGTCTGCTGCAGTTGACTTATCGTCTCTACAAGCTGGTCGACGAGATTCCGCTGCAACTTCGGGCTCGCCATATTCCAGGGGTTTCCAATGTACTAGCCGACATGCTGTCTCGGCCGTCGTCTCCACAGCTGACGGAATGGATGCTCCATCCTGAAGCGTTTCGATGGGTGTGCGACAGACTTTGGACTCGGAAGACGGTGTTTTTACTCGGTTTTGCCACGGCTGCCCGTGTCTCAGAACTCCATGCTCTTGATGTAGACTTGGTACTTTTTCACCGAGATCGGCATGCAGTCAACTTGGCGTTACTCATGAACTTTGTTGCAAAGAATCAGTTACTAGACCAAGCGCCTCGTTCGTATGTTGTGCAGGCCCTCTCCTCTATCGTTGGTCCAGCGGACGTTGAGGACTTGGCATTGTGCCCTGTCAGAGCCCTGCACCAGTACATCGAGAGGACCAGATCTTTTCGACAACATTGCAAGAGACACTTCCTCTCCTGTAACCAGAGTTGGTTGAGGGATATTACCAAAAACACGGTGGCCACCTGGATCCAGTCTTTTATCCTGACCGCCTATCAGAAGGAGGGTTTACCTGCTCCATCTGCTTCTAATCCGCATGAACTCTGTGCCTCGGCTGCCACGATGTCCCTGCACTGCAACATACCCATTCAGCACATTATCACTGGTTGTTTCTGGGCTACGGACTCCATCTTCGCCAACTATTATCTGAGGGATATCTCCACAGAAGACGTTGAGGGGTTCCATCATCTGGGTCCGGTTGTTGCTGCACAGACTCTGTTGAATACAAGCCGTCCTCGTCGCCGTGGATGTATGTCTGATTCTGGGCTGCATGTCCATCAAATCGACAGTGATCGTCAGAGGTTGTTGAAGAAATGGCAGAAGCAGTTTGGTAAACAGATGCAAGAAAATCGACAAAAGGTTCCTCTCAAACACCGAGACGCCTCTGTGCAGATTAAGGATGACTGGAAGGTTGTGGAAGAAATGGATTTTCCCCGTTTGACCAAACTCAATCTGCCACAGATAGAGGAGAGCAAAGATCTCGTGAAATGCGGTGCTATGGAATACTACGACAAAAAATACGACCGAGTTACAACTAAGAATGAAAAGAAGCTGAAGCGCATCAACCGCATCTTTCACAAAGTCACCACCACCGACGACCCCATAATACGACAGAATGGTAAGTTCTCACAGCAAGTCCTTAGAATGGGAGAAGACAAATATGAATTTGAGAAGAAGAACCCTTTTATAGTCTCGGATACAGATGCAGAAGTCGCTTCTGTGGGATACAGGTATCGGAAGTGGCAGCTTGGAAATGACATTACCTTGATAGCCCGGTGTGAACACGATGCCATAATGTATGGACCAAACGGAGAACTGCAGTATATAAACGTTAAATCTCTCAACGAATGGGATTCTCGGTTTTCTGGTGGTGTGGACTGGAGAAGTCGCCTTGACAATCAGCGAGGTGCTGTTCTGGCGACGGAGTTGAAAAACAACAGTTGTAAGTTGGCCAAGTGGACAGTGTGTGCTTTGCTGGCTGGTTCAGATCAGCTCAAATTTGGTGTTATTTATTCCAAATTTGTTGTGTTTTGCTGGGTAACAATGCGTGGTCGCCATTTTTCAAAATGGCGTCTTGTTTACCGGCTTGTTGCAGTTCATGGTTTTTGTTTTTGTCCTATACTTCCCGAGCCTGTTGTTCGTATTTACGATATTCCTGACAACACGTTTGAGTCTGACGAGGAAGAGGATGACTCCTCATCGGAGGACGATGAGGACAGTGAATCTGAAGATGAATTGGACAAGTGATGCTGTGAGGGTGGATGGTGGTGTGTTACATCATGGTTACACCAGCTACATCATTGTTACACCAGCTACATCATGGTTACACATGTTATGGCATGACTACAACCATCTCAGAATGGTCTGTTTAAGTTACAATGGTTTTAGTTTCAACTGATACATCTACGGACTGATCATGGAATGTAAAATGTGCTGAAAATATTCTTATTGTATTGACTGATACATGCTAAAATATTCTTTCATTAACTTTCTTTCTATATTTTAATTAAATTAATTAGATAAAAAAGGTGACATTATTTGTGGTGTTTGGTATGGTTCATACTGAAGGTCATTATGACCTTCTTGTCTTGTGCTGACTGAAGACATTATAATTGATTTTTAAATCAAAATTAATTAATTGAGATTTGCCAGTGATTATGGGAAATAAAATATTCTTATTCCCTTTGATTAGTTTTGTTCTTAATATTACTACTGCAGTGATGTCTGTACAGACAGCACACAGCCATTTTCAGTGTCATTACTGTGTGTAGCAGCTTAATATAGTCTGGTTTCGGAAATATATCTATATTTTTATTTTTTAAAGAAAAAAATAGGCTAAAACATCTTTTCAAATCTTTCTCCGATAGTTATAAATAGGTTGATCTCTATAGTATTTAAATAACCCATTGATTTAAAGTTACTTTTTATTTTTATTGCTAAAGGATAAAAAGTTTGTTTTATTTAACGACGCCACTAGAGCACATTGATTTTTTTAGCTTATCATCGTCTATTGGACGTCAAACATATGGTCATTTTGACAGTTTTTTAGAGGAAACCTGCTGTCGCCACATAGGCTACTCTTTTATGACAGGCAGCAAGGGATCTTTTACTTGCACTTTCCACAGGCAGGATATCACAAACCATGGCCTTTGTTGAACCAGTTATGGAACACTGGTCAGTTCAAGTGGTTTACACCTACCCATTGAGCCTTGCGGAGCACTCACTCAGGGTTTGGAAAATCCCATGCCTTGACTGGGATCCGAACCCAGTACCTACCAGCCTGTAGACCGATGGCCTAACCACGACAATAATAACAACTGTACATGTGGTATGCTGGCATTTATATAACAGCGAAATGAGGCAATGCTCTGGTGTAAGGGCGGATAACTCAGAATTTTTATGATCTGCATTCATTGATTTTAGGGGCGGGACGTAGCCCAGTGGTAAAGTGTTCGCTTGATGCGTGGTCGGTCTAGGATCGATCCCAGTCGGTGGACACATTGGGCTATTTCTCGTTCCAGCCAGTGCTCCACAACTGGTGTAACAAAGGCCGTGGTATACACTATCTTGTCTGTTGGATGGTGCATATAAAAGATCCCTTGCTGCTAATCGAAAAAGTAGTCCATGAAGTGGCGACAGCGGGTTTCCTGTCTCAATATCTGTGTGGTCCTTAACCATGTCCGACATCATATAACCGTAAATAAAATGTGTTGAGTGCATTGTTAAATAAAACATTTTCTTCCTTCCTTGATTTTATTTTTTGTATGTCAGTTACCATAAAAGCAAGTGACTGTACTTCCTATAAATAGCAATCATTATAAAGTAGTGTTCTCGATATTGAGGTATTTTTCAAATGATTTATTCAGACATACCAATTGCTTTAAAATGCATGCTGAATTAAATGATGTTCGATTATTCAAATGGTTTTTAACATCACAAAGCGGCTGCAGATGAA

Transcript

ctg560-3.15-1

Protein

Gene family

Gene family	Subfamily
-	-

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF05091	eIF-3_zeta	Eukaryotic translation initiation factor 3 subunit 7 (eIF-3)	Family	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR007783	Family	Eukaryotic translation initiation factor 3 subunit D	Interproscan
IPR011010	Homologous_superfamily	DNA breaking-rejoining enzyme, catalytic core	Interproscan
IPR013762	Homologous_superfamily	Integrase-like, catalytic domain superfamily	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR12399	EUKARYOTIC TRANSLATION INITIATION FACTOR 3 SUBUNIT 7	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0003677	Molecular Function	DNA binding	Interproscan
GO:0003743	Molecular Function	translation initiation factor activity	Interproscan
GO:0005737	Cellular Component	cytoplasm	Interproscan
GO:0005852	Cellular Component	eukaryotic translation initiation factor 3 complex	Interproscan
GO:0006310	Biological Process	DNA recombination	Interproscan
GO:0006413	Biological Process	translational initiation	Interproscan
GO:0015074	Biological Process	DNA integration	Interproscan

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID	Source
-	-	-	-	-	-

Expression pattern

1. Expression trend for ctg560-3.15-1 global RNA-seq network