Gene detail

Detailed information of ctg553-1.0-1 in Gigantopelta aegis Gene info

Gene ID	Annotation	Chromosome	Start	End	Strand
ctg553-1.0-1	UNCHARACTERIZED	chr9	24045234	24094708	-

Gene Structure

More details in Jbrowse Sequence

CDS

ctg553-1.0-1

ATGCGATGGGACATAGGTTCAGCTTTACAAGTCACAACAGAAGAATCCCGTTATTCAAGCAAGAGAAGTGCAGGAAAGGAGGACCACAAAGAAAATGTTGGTTCTGTGAATGGAGCAAGTGGAAAAAGACAATTTATTGAACATGGCGGCAACCGAACAGAGTTACATTCCAAAGATTCAGTTTTGCAAGATCAACCTTCTCCAAGAAAGTGTTCTCGTAGTGATTCACTGATTACTCGTTTCAAAGATAACAGTCTGGATACAAGCTCCTTGTTATCTAAGAATGCGTTCCCTTGCAAAGTATCATCACTGGCTGTTCCGTCAAGTAATGAATCACACACAGAGCCTGAGGAAGATGAAATCTTATCATATGAAAAACTGAGATTGAAGAATGTGCATGACAATGCTGAGTTTTTGGCTTCTCTAGGAATCCAGGAAGCAAAGCAGAACTTGCAAAGAAAGAAAGAGAAGCCAAAGAAAGACAAACTTTATCAAAGACCAAGAGCGTTAGAAGCATATGATAGGAATCAAAACTTTGGAGCTGAAAGATTTGAGGAGGATGACTACTCTGTTGCGACACCCGATCCAGCCCTCTATAAAGATGTCAATGCTGACAGCAACTTCACAACATTCAAAGAAGAAAATATTGATTATTATTTGAGCCAGTTTGAAAAAAAAAAGGATATTTTTCCACCTGCAAATACCTATGCAGTAACACACGATCACGACTACTGTGTATCTTCTTTAGAAGATATTTGGCTACAGAAAGCAAAAATATCTAAAATATCTGTAGATGATATTAAATCGACTGAGCAGGAAACAAGAGGTCAGTCCACAAACAGTGTTTGGTTCACTCAGAGAAGAATGCGCATTACATCATCACAGTTTGGCAGAATCTGCAAGGCAACAGACATGACAAATTTCCCAAATTTAGCCATTTCTCTAACATCAGTCAGTAAATTCACCAGCCCCTCTGTTAAACACAGAAGGAAGTATGAAAGTATTGCAGTTGAGAAATATGAAAAATTGCAAGTGTGTGTGACTGAAAAGTGTGGACTGTTTGTGTGTAAAGAGTACCCATACCTGACTGCATCACCTGACAGATTGGTGAACCATGAACTCGTACTTGAGGTGAAATGCCCATATGTTGCTAGAGACAGAAGAATCAGTCCTAGTTCAATACCATACCTGTTTTATGATGATGATGGAAAACTAATGGTGGATTCTAATCACGAATACTATTATCAAGTTCAAGGTCAGATGCTCTGTGCTGACAAACAGGCATGTGATTTTGTCTTGTTCACATTAAAAGACATGAAGTACATGACTGAAATGTCTGAAATGTCTGAAAATGCTAAAGAAAGCTCCCCAAGAGAACCAACAAGAAGGAGTCTGAGGGTTCGCAGTATCAAGCCGATAGACGCGGTGGAGACTCCCTCCGTGACGTACTCGTCTGTGAGAAACAGATACATGGTGAGTCGGGAACAGCTACATGGTGAGTCGGGAACAGCTATATGCTATATAGTGAATCGTGAACAGCTTTATGGTGAGGTGGAACAGCTATATGAAAACTTACACAACAAGCTGCGCGACACAGTCCGATCAGCGTGTGATGTGGAAGAACAAGTGGAACCGCTCACATCATCACTGAAGAGCTTCATGGAAGAGTTTAAAAAACTGAATCTCGGTGAAAACCGAGTAATTAAAGTGGTCAAGGAGAGGATATTTTCACTTGCCATCCACCCATCGGAGAACAAGATCCTGGTTGCAGCTGGAGACAAGTGGGGCAACCTCGGTTTTTGGGATGTGGAATCTGAAGATGACGCTGTGACTGCCTACACTCCTCATACGTCACCTATTAACCACGTGGAGTTCTGTCAGTGGAAGCCAGCCACAGTGTTTACCTGTAGTTACGATGGAACGTTCCGACATGGTGATTTTGAACGAGCTGTCTTCAGTGAGGTGTATTCTGTTCCCGTGGAGGAAGACATAATGCTGAGGTCGTTTGGTTTCCAGTCGAAAGATGTAGTCGCCATTGCCCAGTCTGATGGAACATCTGCAGAGAATATATATCACCTCCACAAGAAAGGCCTTCGAGCACTGGACATTCATCCCACTAACAAACAGTATTTCCTCACAGGATCTGTCGATGGGTCGGTATGTTTGTGGGACATGAGAAAGATGAAATCAAAGTCAAACGTGGCAATTGCCACAATGATGCATGCCCGAAGTGTTGACTCAGCATGTTTTTCGCCCATCACAGGAAACAAAATACTGTCATGCTCGTCAGACAACACAATCAACCTGTTCGACAGTTCCACATTGAATAAGAATATTACACGGACACATTCCATTAAACACAACAACTACGTTGGGCGGTGGTTGACAAAATTCCGCGCCGTGTGGCATCCATCACGAGACGACCTGTTTGTTAGTGGAAGCATGACACATCCCAGACAGATCGAGATTTTCTCCGACACTGGTCAGCTTCTCAAAGCATTCTCTGATGTTAGCCTGAATTCTGTGTGCTCCATCAACATGGTCCACCCAAGTCGCAACATCCTCGCTGGTGGCAACTCCAGTGGCAGGGTGCACGTGTTCATGTAG

Transcript

ctg553-1.0-1

Protein

Gene family

Gene family	Subfamily
Ubiquitin Family	UBD\|Other\|Beta-prp
Ubiquitin Family	E3\|E3 adaptor Cullin RING\|CDC20
Ubiquitin Family	E3\|E3 adaptor Cullin RING\|DWD

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF00400	WD40	WD domain, G-beta repeat	Repeat	Interproscan
PF09588	YqaJ	YqaJ-like viral recombinase domain	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR001680	Repeat	WD40 repeat	Interproscan
IPR011335	Homologous_superfamily	Restriction endonuclease type II-like	Interproscan
IPR011604	Homologous_superfamily	PD-(D/E)XK endonuclease-like domain superfamily	Interproscan
IPR015943	Homologous_superfamily	WD40/YVTN repeat-like-containing domain superfamily	Interproscan
IPR019080	Domain	YqaJ viral recombinase	Interproscan
IPR036322	Homologous_superfamily	WD40-repeat-containing domain superfamily	Interproscan
IPR050853	Family	WD repeat-containing DNA damage-binding protein	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR14773	UNCHARACTERIZED	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0003677	Molecular Function	DNA binding	Interproscan
GO:0005515	Molecular Function	protein binding	Interproscan
GO:0005634	Cellular Component	nucleus	Interproscan
GO:2000001	Biological Process	regulation of DNA damage checkpoint	Interproscan

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID	Source
-	-	-	-	-	-

Expression pattern

1. Expression trend for ctg553-1.0-1 global RNA-seq network