| Gene ID | Annotation | Chromosome | Start | End | Strand |
|---|---|---|---|---|---|
| ctg53-3.8-1 | TRANSPOSABLE ELEMENT-RELATED | chr4 | 14422283 | 14430704 | - |
| CDS | |||||
| ctg53-3.8-1 | |||||
| Transcript |
| ctg53-3.8-1 |
| Protein |
| ctg53-3.8-1 |
| Gene family | Subfamily |
|---|---|
| - | - |
| Pfam accession | Pfam name | Description | Type | Source |
|---|---|---|---|---|
| PF01026 | TatD_DNase | TatD related DNase | Domain | Interproscan |
| PF01498 | HTH_Tnp_Tc3_2 | Transposase | Family | Interproscan |
| PF13358 | DDE_3 | DDE superfamily endonuclease | Domain | Interproscan |
| PF13518 | HTH_28 | Helix-turn-helix domain | Domain | Interproscan |
| InterPro term | Type | Description | Source |
|---|---|---|---|
| IPR001130 | Family | 3'-5' ssDNA/RNA exonuclease TatD-like | Interproscan |
| IPR002492 | Domain | Transposase, Tc1-like | Interproscan |
| IPR009057 | Homologous_superfamily | Homeobox-like domain superfamily | Interproscan |
| IPR032466 | Homologous_superfamily | Metal-dependent hydrolase | Interproscan |
| IPR036397 | Homologous_superfamily | Ribonuclease H superfamily | Interproscan |
| IPR038717 | Domain | Tc1-like transposase, DDE domain | Interproscan |
| IPR047655 | Family | Transposase IS630-like | Interproscan |
| IPR052338 | Family | Transposase_5 | Interproscan |
| PANTHER term | Description | Source |
|---|---|---|
| PTHR23022 | TRANSPOSABLE ELEMENT-RELATED | Interproscan |
| GO terms | Category | Description | Source |
|---|---|---|---|
| GO:0003676 | Molecular Function | nucleic acid binding | Interproscan |
| GO:0003677 | Molecular Function | DNA binding | Interproscan |
| GO:0006313 | Biological Process | DNA transposition | Interproscan |
| GO:0015074 | Biological Process | DNA integration | Interproscan |
| GO:0016788 | Molecular Function | hydrolase activity, acting on ester bonds | Interproscan |
| KO | Enzyme | Enzyme ID | pathway | mapID | Source |
|---|---|---|---|---|---|
| - | - | - | - | - | - |
| 1. Expression trend for ctg53-3.8-1 global RNA-seq network |
Maintained by Dr. Jiajie She in Longjun Wu's Lab & Pei-Yuan Qian's Lab and supported by Southern Marine Science and Engineering Guangdong Laboratory (Guangzhou) & The Hong Kong University of Science and Technology
© 2024 All Rights Reserved.
