Gene detail

Detailed information of ctg519-3.5-1 in Gigantopelta aegis Gene info

Gene ID	Annotation	Chromosome	Start	End	Strand
ctg519-3.5-1	RNA 2',3'-CYCLIC PHOSPHODIESTERASE	chr3	13439988	13453098	-

Gene Structure

More details in Jbrowse Sequence

CDS

ctg519-3.5-1

ATGTGTTGCAGCTCATCAATTACCCCGTTGATTGTGGACAATGAGATTATTCACAAACTTGAAGAGAAAATTTCGGCATTTAATGACTTTTATAAAACAATCTACGCTTCACAATGTACCACGAACTCTGCCAACTATCGACAGGGTTACTCAAAACTCCTTAAACGAGATACATTTAAATCAAAACGAGGACCGCTACATCCGGGTACGCCACCTTCGGGAACGATTGACTACTGCCACCTCCACAGCCGCAGCAATACCAGGTTTGCGCAGGATATCCGACCAGACCGTACGGAACGTCTACGTGAGGTAGGAATTCGTGCCAGACGTCCAGTTCGAGGTGTCATCTTAACACCACAACACCGTCGACTCCGACTGCAGTGGTGCCAGATTCATCGACAATGCCCTCAACTGCGATGGAGACAGGTGTGGTTCAGTGACGAGTCCCGATTTCTGCTCCGACGTCATGATGGAAGATGTCGCGTGTATAGGCGTCGTGGTGAACGTTATGCGGCAAACTGCGTGCAGGAAGTGGACAGATTCGGCGGGGGTAGTGTCATGGTGTGGGCAGCCATCTCACACACTGGCAGAACTGACCTGGACCACGTGCAGGGCAACCTGAATGCACAGGGCTACATTGACCAGATCCTCCGGCCACACATCGTTCCAGTTTTGACGTGGCCAACCCCAACGCAGTGTTCCAACATGACAACGCCAGGCCTCACACAGCAATTGGGTCTCACAACGGCTTTCCTTCAGAACAACAACATTAATGTCCTTCCTTGGCCATCGACATCACCGGATTTGAACCCAATTGAGCATCTATGGGACGAGTTGGACCGACGCCTCCGACAGCGACAAGTAGGCCGCGTACTTAGATGGGGCAAGGAGCACAGCCCCAGACCCTGTCCGAGCTGGCAGCAGCCTTGCAGGCCGAGTGGGCCACCATCCCCCGGGACGTCATCCGTACTCTGGTTGCTTCAATGGGCAGGCGGTGCCAGGCAGTTAACCAACACACGCGGAGGCCACACCCGCACGTTAATGAGGAGTTTGCGATTACCCACCATTCACACCGTCCGAAAAGTTTGCGATTACTCACCATTCACACCGTCCGAAGAGTTTGAGATTACCCACCATTCACACAGTCCGAAGAGTTTGAGATTACCCACCATTCACACCGTCCAGACGATGGACAAAGCATTTTACACGACTCTGGCGGCTGAAGTCGGCAACATCAAAGAGAAATTTCCTGATGCTACTTTACAACACACCATCTCGATTCGGCCAAATGATTCGATGACTTTGCGTTTTGTTTACAAAGGCTGGTGCCCAAGCAGAGTACCGCTGATTAATGTTAACTTCAGCAGGCGCAGACAGCACAAGAAGAGCGAGACACAGATAGAGAATGAGCTACAGGCCAAGGCCAAAGATCTCGAGTGTCTAAACTCGCCCATGCTGCCTGTTCTTGTAGACTTAGCTGACGCCATTGACACGGGGACCAGTCCATCAGATGTTAATGAAGATACCAACCAATCAAACACTAGTGCAGAGAACAGTCAATCAGATAATACGACAAGAAGTCCAGCTCAGGTTGAATCGTCTGCCACCAAGGGAAAGCTTGAAAAGTCATCTGCCAAAAGTAAAAAAACTAAAGCAGAAGAGAAAACATTAGAGAAAAACACCCCAGCTACTGAAAGTCCGAGAAACGTTGTGTCTGGAACATCGAAGAAAAAGACGAGGGCGGATTCTTTACGACCAAACCATTTCATCGCCATTAGATTCTCAAACCCAGATATTGGCAACGCTGTAGAAAAGGTGATTGACGAAATGGCCGAACATAATCCAGTGTATCGCGAGGCGTGCTACAATCGCCACGACATCCACCTGACACTTTGCACTCTAGCCCTGTACTCCCAGGATCAGATTGACCAGGCCGTCAAAGCGTTGCAAGCTGTGAAACCAGAGCTCGTAGAACATGCTGCCAAGAAGCTGCTGAATATCGAGGGAGTATCAGAGTTCGACGACTGCAAGGTTCTGTACGGGCAAATACAGTCTCCACAGGTGCTTCTGAAATTGCATGCACTGCTAGAGGGACGACTGCAGAAAGAGGGAGTCACCCTCACTGACACCTGCAATCAATACACGCCTCACATGACCATAGGGAACATCACTCAACGTTTTCGACACAAGAATCCTACAGTAAAAAAGTTTCCAGAGGATTTGATAAAGAAATTCAAACATTTGAAATTTGGGCTTCAGAAAGTTGAAGGTATTCACTTGTGTAAAATGGGCAATGAAAGGCGGAAGGATGGGTTTTATACTTGCCTGACAGAAATCATCTTCTGA

Transcript

ctg519-3.5-1

Protein

Gene family

Gene family	Subfamily
-	-

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF10469	AKAP7_NLS	AKAP7 2'5' RNA ligase-like domain	Domain	Interproscan
PF13358	DDE_3	DDE superfamily endonuclease	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR009097	Homologous_superfamily	Cyclic phosphodiesterase	Interproscan
IPR019510	Domain	A-kinase anchor protein 7-like, phosphoesterase domain	Interproscan
IPR036397	Homologous_superfamily	Ribonuclease H superfamily	Interproscan
IPR038717	Domain	Tc1-like transposase, DDE domain	Interproscan
IPR052641	Family	A-kinase anchor protein 7 isoform gamma	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR15934	RNA 2',3'-CYCLIC PHOSPHODIESTERASE	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0003676	Molecular Function	nucleic acid binding	Interproscan
GO:0005829	Cellular Component	cytosol	Interproscan
GO:0010738	Biological Process	regulation of protein kinase A signaling	Interproscan
GO:0034237	Molecular Function	protein kinase A regulatory subunit binding	Interproscan

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID	Source
-	-	-	-	-	-

Expression pattern

1. Expression trend for ctg519-3.5-1 global RNA-seq network