Gene detail

Detailed information of ctg4901-0.1-1 in Gigantopelta aegis Gene info

Gene ID	Annotation	Chromosome	Start	End	Strand
ctg4901-0.1-1	TYROSINE-TRNA LIGASE	chr4	52616187	52633915	-

Gene Structure

More details in Jbrowse Sequence

CDS

ctg4901-0.1-1

ATGCATTTTGTGGTATTACAAACACCAGGATTACCAGGATTACCAAAAAAAATCATTTCAGTTAGTGCAATTATGGCAGCGAAATTAACACCAGAAAAAAAGTTGGAGCTTATGAAGAGAAATTTGCAGGAGGTTTTAGGAGAGGATAGACTTCTGCCTATTTTGAAGGAGAGAGATGTGAAAATCTACTGGGGAACAGCTACGACGGGAAAACCTCACATAGGTTATTTTGTTCCTATGTCCAAGCTTGCAGATTTTCTCAATGCAGGATGTGAGGTAACTATTCTGTTTGCTGATCTCCATGCCTACCTTGATAACATGAAAGCCCCATGGGAGCTGCTGAAGTTGCGGACATCTTACTACGAACATGTCATCAAGGCGATGCTCAAATCTATCGGGGTGCCACTTGACAAGCTCAAGTTTGTGAGGGGAACAGACTTCCAGCTTAGCCGTGAATACACACTAGATATGTACCGACTTTCTTCGGTGGTCACAGAGCACGATGCCAGAAAGGCCGGAGCTGAAGTCGTCAAACAGGTGGAACATCCTCTCCTTAGTGGGCTGCTCTACCCAGGGCTGCAGGCACTCGATGAACAGCACTTAGAAGTTGATGCTCAGTTTGGCGGAGTTGACCAACGAAAAATATTTACTTATGCAGAGAAGTGTTTGCCACAACTTGGATTTACAAAAAGAATACATCTAATGAATCCAATGGTTCCAGGTTTAACAGGGACAAAAATGAGTTCTTCCGTAGAGGATTCCAAGATAGATCTGCTTGATTCACCTGCTCAGATAAAGAAAAAGCTCCAGAAGGCGTTCTGTGAGCCAGGAAACATAGAGGATAACGGGATCCTGTCTTTCTGTAAATACGTTCTCTTCCCACTGAGCTCCACAAAAGTTAGTGCAATCATGGCAGCGAAATTAACACCAGAAAAAAAGTTGGAGCTTATGAAGAGAAATTTGCAGGAGGTTTTAGGAGAGGATAGACTTCTGCCTATTTTGAAGGAGAGAGATGTGAAAATCTACTGGGGAACAGCTACGACGGGAAAACCTCACATAGGTTATTTTGTTCCTATGTCCAAGCTTGCAGATTTTCTCAATGCAGGATGTGAGGTAACTATTCTGTTTGCTGATCTCCATGCCTACCTTGATAACATGAAAGCCCCATGGGAGCTGCTGAAGTTGCGGACATCTTACTACGAACATGTCATCAAGCTCAAGTTTGTGAGGGGAACAGACTTCCAGCTTAGCCGTGAATACACACTAGATATGTACCGACTTTCTTCGGTGGTCACAGAGCACGATGCCAGAAAGGCCGGAGCTGAAGTCGTCAAACAGGTGGAACATCCTCTCCTTAGTGGGCTGCTCTACCCAGGACTGCAGGCACTTGATGAACAGTACTTAGGAGTCGATGCTCAGTTTGGCGGAGTTGACCAACGAAAAATATTTACTTATGCAGAGAAGTGTTTGCCACAACTTGGATTTACAAAAAGAATACATCTAATGAATCCAATGGTTCCAGGTTTAACAGGGACAAAAATGAGTTCTTCCGTAGAGGATTCCAAGATAGATCTGCTTGATTCACCTGCTCAGATAAAGAAAAAGCTCCAGAAGGCGTTCTGTGAGCCAGGAAACATAGAGGATAACGGGATCCTGTCTTTCTGTAAACACGTTCTCTTCCCACTGAGCTCCACAAAAGAATTTTGTGTAAAGAGGTCTAAGGATTTTGGAGGAGACATAACCTATCATTCATACGAGGAACTGGAAAAATCCTTTGCTAAAGAGGAACTGCACCCTGGAGACTTGAAGTCTGCCGTGGAGGTTTACTTAAATCAGCTCCTCGATCCTATCAGAAAGGAATTTGAATCACCCGAGTTGAAAAAAATAACAGCAGAAGCTTATCCAAGCAAAACAAGTAAGCAGTTACAGGACCTCTAGATTATGGTAGCCCCACTCCCATGGCTAGTGATATTCAATGTTGGGCTAGCAAATAACTACTATTGCCATGCCCGACAGCTAGTCAATTATTTTTGGATCAAATGTTGCAGTTACATCTATTTTGTAAATATTAATATCCTGCCCCTACCCCCCCCCCCCCCCCCCCCCCCCCAATGTTTGTGTTTTTAACCTCTATCTCCCTCTTTAGGTGACATATATGATTATTACTATTATTTAGTAAAATCGTATTAACTTGAAGTAAACTAGGGCTAGTGAATT

Transcript

ctg4901-0.1-1

Protein

Gene family

Gene family	Subfamily
-	-

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF00579	tRNA-synt_1b	tRNA synthetases class I (W and Y)	Family	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR002305	Family	Aminoacyl-tRNA synthetase, class Ic	Interproscan
IPR002307	Family	Tyrosine-tRNA ligase	Interproscan
IPR014729	Homologous_superfamily	Rossmann-like alpha/beta/alpha sandwich fold	Interproscan
IPR050489	Family	Tyrosine--tRNA ligase	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR46264	TYROSINE-TRNA LIGASE	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0000166	Molecular Function	nucleotide binding	Interproscan
GO:0004812	Molecular Function	aminoacyl-tRNA ligase activity	Interproscan
GO:0004831	Molecular Function	tyrosine-tRNA ligase activity	Interproscan
GO:0005524	Molecular Function	ATP binding	Interproscan
GO:0005737	Cellular Component	cytoplasm	Interproscan
GO:0006418	Biological Process	tRNA aminoacylation for protein translation	Interproscan
GO:0006437	Biological Process	tyrosyl-tRNA aminoacylation	Interproscan

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID	Source
-	-	-	-	-	-

Expression pattern

1. Expression trend for ctg4901-0.1-1 global RNA-seq network