Gene detail

Detailed information of ctg47-12.4-1 in Gigantopelta aegis Gene info

Gene ID	Annotation	Chromosome	Start	End	Strand
ctg47-12.4-1	CELL DIVISION CONTROL PROTEIN 6-RELATED	chr13	35031306	35053975	+

Gene Structure

More details in Jbrowse Sequence

CDS

ctg47-12.4-1

ATGGAGCAAACTCAGGAATGTCCCTTCAACAACTTCAAGACATACGACTGGCTGCTCCTAGTCCAGTCGGGTGCGACGATTTACCCAATACTACCCAATACTTATCCAAAACTACCCAATACCACTGCTAACTATTATATCATCACAAATAATTTTTATAAAATAAAAAAAGAGGTAACGATGGCAGCAGTGCAGAGAAAATTGGAGTTTAAAGTGAGAAAAAGTTCTCGAATTCAGGCTCGAGTGAAATGTGATGAAACAAAGGAATCCATCTCTGAAAACCATCCACAGATCTCTCCAAGGAAGCGACAAGGAGATGATTGGGAGATTTCTCTCAGCGTAAAACCACTATCATGTTCACCTCACAAGAAGCAAAAAGAACTACGGATACTGAGTCGTGAAACTCCAATAAAAACATCTCTAACATGTCGGTTTAAACCGGACGATACAGACTGTGATACTTCAACAAAATCGGGTTTAGCTGTTGTCGGTGTAAAACCAATACCGACACCGAAGACCCCAGTAAAATGTAACTCCACAAACAGAGAGTTCACAGTGATCTCCCCTTACAAGTCTCCTAAACGTACGCTCGGCTTTCAACGGCTTATCACATCTCCAGTGAAAAGTCCCTGTCTGTCATTGAAGAAACTTAGTCTGAATTCTCCTCTGCGATGTCACAGCCCAGTGAAGTCTGTTCTAAATTCTTCAGAACAATGTCGCAGTCCGGTGAAGTCCAGTTTAATAGCTCCACATCGCAGTGACAGTCCAGTGAAGTCCAGTTTAAAGTTTCCACAAGAATGTCGTAGTCCAGTGAAGTCTAGTTTAAATTCTCTTCAACCCTGCCAAAGTCCAGTGAAGTCTTTCATAGTCAATCAGGTTGCTGATTCTTTATTTTCTGAGAAGGAAAACACTCCAAAGAAGAAAGTGGTGGTTACCGACAGGAAGTCTGTGTCTATGTTGAAGCTGCAAAGGGTTAACAGTTCTGCCTATTCGGAAACGAAACAAGTACTTCACACAGCGAAACCCGAACAACTCCATTGTCGTGAGAAGGAGGTTGGGGAGATTCAGAGTTTCCTGGAGGGACACCTAAAAAACCAGACTGCTGGCAGTATGTACATCTCAGGGGCACCCGGCACGGGCAAGACAGCATCACTGCTTCACATTATTGACATTTTAAAGAGAGACCACTCCTGTAAAATGTCCTATCTCAACTGTATGATGCTGAAAGATTCTGCAGCTGTGTTTAAAACCTTGCATGAGCAACTGACGGGAAGGAAGTTGCCTAGCAACAAGGATGTTATAAAATATATGGAGAAGTGTGTTACCGCATCAACAAAAAGCTTAATTATTGTGTTGGATGAAATCGATCAACTTGACAGCAAGCATCAAGAAGTTCTCTACACCATCTTTGAATGGCCTTCTCTACCCAAATCAAAACTTATTCTCGTTGGCGTGGCCAATGCATTGGATTTCACTGATCGAATTCTTCCTCGACTCCAAGCTAAACCCAAATGTCGACCAAAACTTGTGAATTACGCCCCTTACAGCAAGGATCAAATAGTCACCATAATAAACAACCGACTCAAGCAGCTGCAGGAAGATGGTTTGGCTGTAATTGAACCGAGCGCCATCCAGTTTTGTGCGAGGAAGATTTCGGCAGTGGCCGGAGACATGCGCAAGGCTCTGGACGTTTGTCGGCGATCGGTGGAACTCGTGGAGCAGGATATCAGGAGCCAGCAGGTGTTGAAAGTCTCAGGTATTCTCATCTTCTTATTACGAAACATAGAACAGGACATGAGGAGTCAGCAGGTGTTGACAGTCTCAGAATGCAATAGTCCAAGTAAAAAGAGAGCCCCTGTCCCTAAGAAGATAACGGTTCACCACATCTCACGCATCATGTCCGAGGTGTATGGGTCGAGTGTGAAGACTTCCTCTAGTCAGGAGACAATCCCGCTCCAACAGAAACTCATGCTGTGTAGTCTGTTGTTACTAGTCAAGAATGGCAAGACAAAAGAAGTCGGTCTTGGGAAGTTTCATGAGACCTACTGTAAAATCTGTAGGAAACGTAAAATAGCGGTGATCGACCAATCAGAATTCTTCAGTCTGTGCAGTTTGCTTGAAGCCCGAGGCATGATGGGAGTAAGGAGAGGGAAGGAAACGAGACTGGCGAAGATTATTCTCAAGTTGGACGAGAAAGAACTGGAACACACTCTACAGGACCGAGTTCTCATGTCGTCCATGCTGTACGATGGGCTGCCAAAGTGATGTGCACTGGGAAAGAAGACTGGGAAAATTGTGTGACCAAATACCTGTGCTTTTTCATTAGTTTCAGAACTGTCAAGGCGGGACGTAGACCAATTGGGCTATTTCTCACTCCAGCCAGTACACCAAGACTGGTATATCAAAAGCCATGGTTTGTGCTGTCCTGTCTGTGGGATGGTGCAGATAAAAGATGTCTTGCTACTAAGAGAAAAATGTAGCGAGTTTCTTCTCTAAGACTGTATGTCGAAATTACCAACTGTTTGATATCCAGTAGATGGTTAATAGATCAGTGGTGTTAAGCAAAACCGGCATCGAAATAATCAGCGTCTGGTAACCTATGAACTGGTTGCTACAAAATATGGACCTGGTAACCTATAGGTTGCGGTACATTAATATTTCCAGTATAAAATGGCCAGTATAATTAGTCGCACTGAAAAGGTTATTTATTCATAAAGTTATTCTTGTACTAATATTTGTACATGTGAATCTTATATTTAAATAACACACAATCTTTTCAACATTTGGACGGTGTAGTTTTTGTTTAATAAGATTGTATGCAGAACAAAGTACAATTCTCAACTCCATGTGGTAATCCCTTCGTAATCTGAACACTGTTCTCAACTTATTGTGATTTTTTTCATTTTGCTGAGCAATGCTGAGGAAACAGTTGAAGTCGAAAATGTCTGCATTTTTTTGGCATTTCATTTCATTTCAACTTATTTTTGTGCTTATGTCCAATCAAGGTTCAAGCACGCTCTCTGAGCTGTCTGTCCAGGACAGTGGGTTAGTTGTTAGTGGTTAATGCGAGAGAAGAAGTTGTAATGGTCTTACACCTTCCCATAGAGTCGTTAAAACTCACTCGGGGTGGGAGCTGGTACTGGGATGCGAACCCAGTACCTACCAGGCTTGTGTTTGATGAATTACCACGACACAACCGAGGCCGGTTTTGGCAATGTAACTTCAGTGAGGAGGTATACTGAGCAACAAAAGAAATGCAGATATTTAGTTTTCTTTAATTTGTTTAAAATTATTCATCTCGTCAAACATGTTACAAAATACTTGCAATGTTCCGATAGCTTCCTGCTGCCTTCCTCAGGGGATTGCAATTCTCAGTAACTTCGTACGGTCCATTCTGGTATACTTAGAAATGACCGTTTGATACGATGAATATAAGGTTTACATGACGTCATGAAGTTCTTTGAAGAGTGACGTCGGTATGTATTTATATTATCTATATTGCTACGTTGATATATAACAAACATCCAACAATATACTGACACAGCAATATATATATATATAATGGCAGTTACTGCAGCCATTGCAAAATAACTGTTTTTAATGTAAGTACGGTTTACTATGTAGGTTATTTGTATAGCACATAGGACAAGGGAGACCACTTGGCTGTGTTGATATTTATATTCAATGACGTCATTGTTTATATTCGTACAGAAATTAAACACTTTGTCGTTACGTTTTGAAGGAAGCTGGACTATTTATTAAACACTTTGTCGTTACGTTTTGAAGGAAGCTGGACTAT

Transcript

ctg47-12.4-1

Protein

Gene family

Gene family	Subfamily
-	-

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF09079	Cdc6_C	CDC6, C terminal winged helix domain	Domain	Interproscan
PF13401	AAA_22	AAA domain	Domain	Interproscan
PF17872	AAA_lid_10	AAA lid domain	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR015163	Domain	Cdc6, C-terminal	Interproscan
IPR027417	Homologous_superfamily	P-loop containing nucleoside triphosphate hydrolase	Interproscan
IPR036388	Homologous_superfamily	Winged helix-like DNA-binding domain superfamily	Interproscan
IPR036390	Homologous_superfamily	Winged helix DNA-binding domain superfamily	Interproscan
IPR041083	Domain	AAA lid domain	Interproscan
IPR049945	Domain	ORC1/DEAH AAA+ ATPase domain	Interproscan
IPR050311	Family	Origin Recognition Complex 1/Cell Division Control Protein 6	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR10763	CELL DIVISION CONTROL PROTEIN 6-RELATED	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0003688	Molecular Function	DNA replication origin binding	Interproscan
GO:0005634	Cellular Component	nucleus	Interproscan
GO:0016887	Molecular Function	ATP hydrolysis activity	Interproscan
GO:0033314	Biological Process	mitotic DNA replication checkpoint signaling	Interproscan

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID	Source
-	-	-	-	-	-

Expression pattern

1. Expression trend for ctg47-12.4-1 global RNA-seq network