Gene detail

Detailed information of ctg461-1.9-1 in Gigantopelta aegis Gene info

Gene ID	Annotation	Chromosome	Start	End	Strand
ctg461-1.9-1	AGAP007537-PB	chr1	20804352	20823141	-

Gene Structure

More details in Jbrowse Sequence

CDS

ctg461-1.9-1

ATGGATGTCAAATTGGATCTCATCAATTTTGGCAGTCTCAGACAAGAAGAATTGAAGAAAGAAACCAATGCCGATCCAGAACTGAACATTCTGAAAGAAGTCATCATCACAGGATGGCCAGACAACCTGAAATTACTTGTTCAAGCCATTCGTCCCTACTGGTCATACAGAGACGAGCTAGCAGTGGAAGATGGAATAATATTCAAAGGGACACAAGTTCTGATTCCAAAATCTCTACAAGGAGATATTCTCAATCAATTACACGCTTCTCATCAAGGAATCCAGAAGACACGGAAACTCGCTCGTGAATCCGTATATTGGCCGCTGATCAATAATGACATTGACAAACTTGTCAAAAGTTGTCCCTTTTGCCAGGAATTGCAATCCCAAAATGCTCCAGAACCATTACAGCCACACGAAATTCCAACAGCTCCATGGAAGAAGCTAGGAACAGATGTATTCCAGATAGAAGACAAGCACTATCTCATTGTTGCAGACTACTTCTCGAAGTACCCGTTCGTAAAGCAGATTACCACCCCAGTGACGAGCAGTGCGGTAGCTCGTGAAATGAAATCTCTGTGTGCTATATTCGGTAAACCAGACTCCATAATAAGTGATAATGGTCCACAGTTCACAGGACAGCCATTCCGCGATTTTGCCCAAGAATGGGGAATCACACTGTTGACATCATCACCGCATTATCCCAGGTCCAATGGTTTTGCTGAGCGAATGGTCGGCACAGTAAAACACATCATTATCAAATGCTTGAAAAACAATCAAGATATCGACAAAGCGCTACTGCATTTTCGAGCAACACCTGCATCGTCAAATGTACCATCGCCAGGCGAACTACTGTTTGGGAGAACCATATCGACAACATTACCATCTAGACAAGAAACAAACCTCACCACTGCAGAGCAGAGAAACGCTCTATCACGAGATCAAGAAACCATGAAATTCTACCACGATGAACATTCATTGTCCACCAACCTATCCGAAACTCTATCCAGATCAACCGGTATGCATTCAGGATCATGCAACCAAGGCATGGACTCCAAGCAAAATCCTCAAGCAAGACGACAACTCGCCCAGAGCATACCTTGTTATTACTGCCAGTGGCAGTACACTACGCCGAAACAGATCTCAGCTCCGAGAGATGAAGATTATGAAACTGACGTCACATCCACTAATGAGTTTGATGGGTCACTCAATCCATCAAGCCTCATTCCGGTTCCCCCAGAATTCAAGAAACTCTCGATTAATAAGAACTCAGGAGAAACCATGCTACACCGAGCGGCCAGGCTGGGATACGTGGATGTAGCCCTGTACTGTCTGCGGACGAGTGCGGTGGATGTAAACGCCCGTGATAATGCTGGCTACACGCCGCTACACGAGAGCTGTGTCCGCGGGGACCTCATTGTGGCTCGCGAACTCGTCACACACGGCGGAAACGTCAACTGCTGCTCGCAGGATGGAATACGACCGATCCACGATGCTGTTGAGAACGACCACATTCAGATTGTCCGTCTGCTTTTGTCATGGGGAGCCGATCCTCTGCTGGCAACATATGGCGGAAAGACCCCGCTGAAAATAGCGAGATCCATCGCCATGCTACAGCTGCTGCAAGGCTACCTGGGAGATCTGAATGGCTTTGAGCCTGACGAGGATGGAACTGTGAAGGAAATGTTCTGGGAGTTCCAAGGATCTTCTGACTTTCTTGATCCTACAGTGAGCCAGGGATTTGACGTGTTTGCCGACATTCCGTCTGACCCGGAGGATGAAGATGACAGTGAACTGTTTGAGATGTCCGATTCGGCCTTGATGAGTTCATACGACCTGCCTCTCGACATCTCACAGACTCCTGAGAGGTGCTTTGCTGTGGTGGACGTCCTAGATAACATGAAGATAACACGGCCAGAGTTCGACAGGCTGCACGGAGCCGAGGACTCCACTCTAAAACTTTCCACTGAATTCTTCATCCAGACCCTGACCACATGCGCTGTTCAGATACCGAAAATAAAGACTTCATTCATCGAGCTGATCACTCTGGAAGACCTCAACAATCTAGGATCAACGTCTCACAAAACAAACAGAAAAATCCAACCCCAGTTGTCGACAACTCATTGCGAGATGAAGACGACAACGACAAATTTACATCAGGAACATTCCAGTGGTGATGCTTTCAAAGAAAACGACAGCCAACAGTGGCAGTCCAAAAACCACAGTTCTGAAAATGTTAAGAAATTCAGAATGTTGTCTTTGGAAAGCAGAACAAAAAATACTACTGGAAAGAATGTGAAACGATTTGCGTCCAGTTTTCAGAGACGGAGTCTGGATAGGTCTGTATCGAAGACTGTGACGTCCACTGCTGGTGGTGGATTGTCGAAAGAGAAATTGGAGTCGGAGGGAAGTATAGGTGCACCTGGTGATAGGAAAGGAGGAGGAGGAAAACAAACAAGTGTTAGTGATAAGTCGAAAAGTGCTTTAGGTTGTGAGAAAATGGCTTGTGACAAATGGAAGCTGGGCAAAAAGGACTGCCTGCAGAAGAAACCAAAGAAACACCGAATCAGAAAGGACAAGTGCATTTCAAAATGGCTCATCCGCAAACGGAATTCTTCTCAGAAGAAGAAAAAATATGCCAAACAGAAACTACTTTCACAGTTGACACAAGAAGTGGCAGATGTTAACGACAACATCGTTTGCAGCACAGAAGGGCAGCATTGTTCAGAAAAATCCTGTAAAATTTCGTTAGCGAAACACGAAAACTTAGTGGATGCGACCTCATCTTCTGGCAGCAGGTCGCATCCGCCCTCGGATACGCTTTCGAGTCTGCGGAGTGTTTCAAAAAATGTGTCTACAAAATCTCTCAACTTGTCAAAGATTGGGAAAATCAGTGCTGCTCCAACTGGTGCTCAAGGGAAGACCTGTGCTACATCAGGTGGTGGTCAGGGCAGATCCTGTGTTAGTCTTGGGAGTGCCCAGGGAAAGGCTTGTTCTGCTGCCCAGGGAAAGGCTTGTTCTGCTGCCCAGGGAAAGGCTTGTTCTGCTGCCCAGGGAAAGGCTTGTTCTGCTGCCCAGGGAAAGGCTTGTGCTGCCCAGGGAAAGGCTTGTGCTGCCCAGAGTAGTATTCAGGGTAAGCCCTGTGCCATCTCAAGTGGTGCCCAAGGCAAGGATTGTTCTTCCCCAGGTGATGTCGAGGACAGTTCTTGTGCTACTAATACCCATTGCAGTGCTCGCGTGAAGGACACATCTGCCATAGCGGGGGGGTCTCACTGTAAAGGCTCCACATCTTCAAATTCTTCTCATGGCAGGATCTCCACCACTACTACAGACAATAATTCACGGGAAAAGACCAATCCTCCTCCTGCGGGAGCGTCACAAGGGAAGACCAATTCTTGCCTGGGTGATGGTCAAGGGAAGGCCTGTCCCACCCCAAGTGGGTCTCAGTGGAAGACGTGCGTTGTCGCAGAAAATGTTCGGGATGGTGCGGGTTCGTCCAAAGTCAAAATGACTCTTCCTTCGAAGTGCGAACAGATGCTGAGACCGAATATTTATTCATTCGAGGAAGATGATGATCCTGACTGTGATTCGGTGAAGATGCCTCGAACCAAGCGTGACCAGGAGATTAAGAAACAGAGCGAGCAGCTGTACTGTTTTGATGACGACTCGGCAGATGAACAAATAACGTTCCGTAAGGTGGACTACAAACATGTGCAGAAAGCATTCAAGTCAAACTCTAGTATTACCTCCACAAAACTCTACAGTCAGAGCTCGCTGAAGAAAGGCGAGCATCGGGACGCCCAGAAACGAAACAATAATACGTAGCTTTGTGATAAATATAGTTTTGTGATGATCGACTTGTCATTATCCATGTCCCATTGTGCCATCATTGGTCCTAACTGTCATCCATGTTGTTTTATATTATCATTTTGTTTATATAATCAAACACTGAATGAAATTTATTTGTGGCTGTCCGACTAAATTTGATTGTTGTGGTATTCTTTAGAGTTTTGTTAATATTACACAGTTTGTGATATATTCTATATAACATATTACCTGTGTATTTGTGTTAGGACAGTTTTGTGTTATTTTGTAATACTTATCCTAATCTCTATTATAATAGCAGTTTTCTGTTTAATGGGATCAAGATCAGGTGACAAGATGGTTGATCCATCACTGCCTTGGGAAGGTTATCCAGACGTTTGTTTTTTGAGGGGCATAAGCATGAATTCCCATGTTTAACTCCCATTAATTTAATTTGATGGGTATAACACGCTCTGGCTCTACTTTGAAAACCACCCACAAAATTGTTCAATTTAACCTTTTTAATTTTGAAACGATAAAAACAACTTCCTTACACATGCAGGTCATAAATAAATATCTCTTAACACATTTTATTATGTTTAGGGGTGTTATTTCTCTCCGATCTTAGTGAGTACAATATTCCCCTCCTAAACATTTTCATGAGTATTATTTTTATGCCTCGGTTTTTTAAAACATTAATGTCTGTTTTACCTCATTTTCATTGGCTGTTGAGAATTTTGTTATGATCCCATTATAAAAACTGCACTATTTTAGTTGTCAGGCCAAGTATTCCTACTTAACAGAATGAATATCCCAAGCTTTATTCATTTTGCTTTACTCCAATGAAATGAACAGTTGTTGATCAGAAAATGGTGATATTGTTACTGTGTTAGTTTATTCAGAGATCTCATACCAGTTTAAATGTCTGACTGAAAATTGCAGTCACAAATAGTTTGTATTAAAAAGATCCCAATGAATTGATGTACATGTATAACTAAAATAAGCTCAAACCCATAATAAATTTTATTTCACATGAGAAATTTAAAGGGTTTTTTTTATGATTTTAGCATCACCCCCAAATGTTTTCTTGTTCTTGTCTTGAATGCAAAAACTTTTGGTACCTTCCTGCTATTTAAGATTGTCAAATTTTAAGCAATTATTTTTTTATCAAGGGTTCTTTTCTTCTCTCGTTTTTCAGGCACGTGTGGGTTAAAACCCCAGATGCTCGAAACATTTTTTATTTCATTTGTCATGATGAATTTTACTTGTAGAATGCACCCTACGTGGTTTCCTGCATATGCACTTTTTTTTTACAGTGTAATAAAAATAAAATTATATGACAGATTATCATGAAATATCACATAGGGCCTAATCTGTTAAATATCGCTCATAATAGAGAAATAAAGACAACGGTAGGCACAGCTGTTTTGACATTGTTAATTAATATCATAAATCCTAACTTTCAGGGTTTTAAGAGTTATTTCCCTTAGATTCGCAACTAATATCACTTCAGTGCAGTGACAAGGTTTATTTATAGGCCTTCCTGTATGGAATGCCATTTTTTCATACTATGAAACTTACTACATATTATTTATTTCTGAGGCGATTGTTTTCTAAATTGTACACAAAAAATAGGATGTTTTTATTGTTTTCAAAACACTTTTACTTTTCTTTTTAGGTCAAACTAAACTGAAATTATTTACAAAAAAAACATTTTCATAGGAGGATGGGACGGACTATAGTTACTGATATATGAAAGGCGTCTTGTGATGTTTACCATAAGTCAACAGATTTATGTCAAGATTAAGAGAAATTATAAATAGGTGTTGGACGTGTCAAGTCTTCCTTTATTACCTCAAAGGATCCATTTATCTAGTTAACGTGTTAACATTTTTATCAAAAAAAGTTTTTTTTTTTTTTTTTTTTGAAATTGATGTTCATCAAATATTGGATTTAGTACATCTGTATTTTTCAAACGTTATCACTCAAAGTAACCGACATGTTAAAATTCTGAATAAAGTTATGGTATACATTTTTTCCAGTAGAATCTTAACTTTGCAAATAAAGATGTTATACAAGTACAGGTATGTCAGTTAATATGAATTACTGAGAAAGAACTAATAATAATGTACAGTATGCAAAAAAGTAACAGAGAAAAATGATGTTTGTCAAATTATAACTTTGTTGACAATTTGTTTTAATTAATTATTGTGCCAGATTTGACTTCTGTTTTAAAAGTGTAGGCTTACATTTATTTACTTATTCTGTGAAACAAATCAATGTGCATTAGTGGTGTCATTAAAAATAATAATAATAAAAATAACAATTATTATTATTATTCTGTGAAACAGCAGAAGACAATATTCTAAATTTTACATGCCATTGTGAAAATATGAATTATAAATGTCAAAAAGCCCCCCCCCCCCCCCTAAAAAAAACACCACCCAACAAACTGGCACAATATGTTAGAAGTGTGTATTTTCTCAAATTAATTTTTAGAATGCAGTTCTTTTCTTAAAGTATAAATACACTGGCAATGTCAGAATTGACAAATAGCAAACGCTGCATCATATAAATATTCATTATTATTTCAAATGATAGCTTTATGAGTTGTATACTAAATTTAATATTTGTTGAACATGAAAAATAAAAATTATTAACTCTATTTCAAGTGATAGCTTTATGAGCTGTATGCTAAATTTAATATTTGTTGAACAATATTTGTGATAGTTTCCAATAAAAAATTTTTTTAGTTTCAATGAAAGAAAAACATTTGTGTCTGTGATTAATAAAATTAACAGATATGTTTTTATATATATTTGTGACATATAATTGTTAGTATTAATTCAAATTTGTTACTTATGGTTTAATTTTATATTAAACATTTATTTGTTAATAGAAGTTTAGTATACTCAACAAAATTAATTAAGTGCTAGTAGACGTTTTGGTCAATATTTGCTAGTGTTAGATTATATTAGCAAGTTTTGCTCACAGATAATTTCGAAACATTGTTTGAGTAAATTCTGACTGGTGATGGTGTACAAATTGTGTATGCTGTGTTTGTTTTTTAAATTTTAGATTATAAAGACAAATGCCTAAACTCGGGGCTCATCCTGTACAGTGACAAATTAGCCAGTTGCTAATATTTATACAAAATGGCTACAAAATTTTGTCATTGGCTAATAAAATATTCCTCAAATTAACCACATTTTAATAAATTTCAAGGAAATACTCTTTAATTTTAGAAAATTGGCTAAACAAAATTTTTTTCCAGTGTGAGTTTAACTATCTACTGGATCTTAACTACTATTGTTGAGTATATTTACTGTTCGTTATACAATTATATTATGGTTTTAATGTACTGTACTTAATTCTCAACATATTCTTGAATTTTATTCGGAATGAAGAATATACAGAGATTTGGACATGAATGAATTTTTTCCCAATGTTTCTTTACGCTATTTTTAATATAGTGCTGGACATTATATATATATATATAGTATATATATATATATATATATTACACATACAATTTACAAAGACACAAAATAAGTCTCTGACTATTGTCAAGGTTCTGCATTGTTTTATTGCAGTTGCACTTTTGTGTGTAGTAAAACATCCCATGCAGGAGCAGGAGGTAGCTTTGTGGTAGAGAACCCATCCGATGATGTGGTAGGTGCTGTCCTGTGTCAGCTATGTTCATGCAACATGTGTAGTCATGGTGATTTTTTTCTCTCTCCAATCACTGCAGTGGTCGAAATATTGCATTTCAGTCCTGACCTGTTTTTTTGGTCCCGAAGATTGTTCTGCCTGCCTTCCTGTTGATTTGCAGTTATTTGCATTTATATTCATGCATATGTTTGTTTCTTTTATTTTGTTAACGGTTATAATACACAATCATGTTTGGTCCAGCAGGGTTTGATTCAGGCTGCAGAATTTGTAGTTTGCTGGACTTAATGTTTCAGCCAATTTCGACCCAGTATGGTGTTCACAGAGAGAGAGAGAGAGAGAGAGA

Transcript

ctg461-1.9-1

Protein

Gene family

Gene family	Subfamily
-	-

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF00665	rve	Integrase core domain	Domain	Interproscan
PF12796	Ank_2	Ankyrin repeats (3 copies)	Repeat	Interproscan
PF17921	Integrase_H2C2	Integrase zinc binding domain	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR001584	Domain	Integrase, catalytic core	Interproscan
IPR002110	Repeat	Ankyrin repeat	Interproscan
IPR012337	Homologous_superfamily	Ribonuclease H-like superfamily	Interproscan
IPR036397	Homologous_superfamily	Ribonuclease H superfamily	Interproscan
IPR036770	Homologous_superfamily	Ankyrin repeat-containing domain superfamily	Interproscan
IPR038227	Homologous_superfamily	PCGF Ub-like fold discriminator superfamily	Interproscan
IPR041588	Domain	Integrase zinc-binding domain	Interproscan
IPR047144	Family	BCL-6 corepressor-like	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR24117	AGAP007537-PB	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0000122	Biological Process	negative regulation of transcription by RNA polymerase II	Interproscan
GO:0003676	Molecular Function	nucleic acid binding	Interproscan
GO:0003714	Molecular Function	transcription corepressor activity	Interproscan
GO:0005515	Molecular Function	protein binding	Interproscan
GO:0005634	Cellular Component	nucleus	Interproscan
GO:0015074	Biological Process	DNA integration	Interproscan

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID	Source
-	-	-	-	-	-

Expression pattern

1. Expression trend for ctg461-1.9-1 global RNA-seq network