Gene detail

Detailed information of ctg449-0.1-1 in Gigantopelta aegis Gene info

Gene ID	Annotation	Chromosome	Start	End	Strand
ctg449-0.1-1	UBIQUITIN CARBOXYL-TERMINAL HYDROLASE	chr6	93736926	93753250	+

Gene Structure

More details in Jbrowse Sequence

CDS

ctg449-0.1-1

ATGTGTCCTCTTCAAACATCTAATCCTGGAAAGGTTACCAAAGTTAGTGTCAAATGGGGAAAAGAAAAGTTCAGCGATATTGAATGCAACACTGATGAACCTCCTGTTGTCTTTAAAGCACAGCTGTTCGCCTTATCAGGCGTTCAGCCTGATCGACAGAAAGTAATGGTGAAAGGATCAGTTTTGAAGGATGATGACTGGGGAAGTCTGAAGTTAAAAGATGGAGCAACACTTCTTATGATGGGAACAGCTGATGAGCTACCGAAGGAGCCGTCCGAGAGACCCACTTTCATGGAAGACATGACGGAGCAGCAGTTGGCTACTGCGCTTGCTTTGCCATCTGGTCTGACTAATCTTGGGAACACATGTTACATGAATAGTGTTGTTCAGTGGTTGAGGGCTATACCTGAACTGAAAGATGCTCTCAAGACATACTCCGGTGGTCTTACTGTTGGTGGTGCTATTGCCCCAGCTGATTCTATAACTGCAGCCCTAAGGGATCTGTATAATTCCATGGACCGTTCTGGAGCTTCCATTCCGCCCATAATATTTCTGCAAGTTCTACACATGGCTTTCCCACGCTTTGCAGAAAAGGGCGAACATGGGGGATTTCAACAACAGGATGCCAATGAATGTTGGACAGAAATTGTTCGAAGCCTACAGCAGAAATTACCAGCACAGAAGTTGGAAGGAACTCCATCATCTAGCAGCTTCATTGACCAGTATTTGGGAGGAGAGTTTGAAGTTGTAATGAAGTGCAATGAAGCTGCAGAAGAGCCAGAAACACGTTCTACAGAAAAGTTCTTACAGCTTAGCTGTTTTATAGAAAAAGAGGTGAAGTACATGCAAACAGGTTTAAAATCTAGGTTAGAAGAAACGATAACAAAATATTCCCCCACGCTAGAAAGAGATTCTGTTTACACCAAGTCGAGTAAAATCAAGAGATTGCCAGCATATCTGGCAATACAGTTTGTACGCTTTTATTTCAAGGAGAAGGAGGCCATCAATGCAAAAATTCTAAAGGATGTGAAATTCCAGTTAAATCTGGACGTCTTTGATTTGTGTACAGACGAGCTACAGAAAAAGCTTATTCCAATGAGAGACCGTTTTAAGGAAAGAGAAGATCGTGAGCTAGTAAAGATGGAGGCAAATGCAAAAGGCCAAAAAGCTGTTGTGAAAACAGAAAAAGACACTCTGAAAAATTATGAACCTTTCTCTTTTCCTGATGATGTAGGTTCCTCCAACAGTGGCTTCTACGAACTGAAAGCTGTCCTCACACACAAGGGCAGGTCCAGCTCCAGTGGTCATTATGTGTCCTGGGTTCGCAAGACTGGAGATGAGTGGTTGATGTTTGATGATGACAATGTTTCACCAGTGACATCAGAAGATATTTTGAAACTATCAGGGGGAGGTGACTGGCATTGTGCATATGTTCTGTTGTACGCTACAAAACGATTAGAGATTGAAGACACTACAGTGACTATGGAAACGAGCTGATCTATTCATCACTTGTACATTGACTGTAATTGTGAAAGAAATTCATGAGCTTGACAAATGATTTTTTTTTTTTTTGAAAATTATTGGTGCAACTGTTTGTCAAATAACATCAAGCTATTATTATTACACCAACTTTGTTATTAATTTGATGTCCGAATTTCTTATCCACATGATACACAAGTAGGAGGGAGGGAGGTGGGGGCGCTGTTGGGAAGCACATTCACTGCACTATGGTTAATAGTGTTCAAAAACTTTGGTTTTCTTATAAAGGAAAAACATTTTAAAGGAATCATGTTCATGGTTCAGAGAGTACTTACTTCCTCATCGCCCTCACCCCACATGAGCTAGTCTTTTGAAATTTGTATGTGGAGGCACATACAAGAATTTGAAAATAGAGGGACGTGCAAAATGTTTAATGCGTGTGTGTGCAATTCACATGATACTCAAGTTGATTACCCTTCATATTGCCCAAATATGTCGGACCTTGTTAGAACGACCATCGTTACTATGACATTTACACATCTGACCACAAATTGTTGGGAACAAATGTACATCAATGTTATTCTGTTCATTACACCAGAATTCACACCTTCCGGCAGAGCAAATTAGGAATAAATGTGCAACATATATTTTTTTCATTTAAAAAGTGGTGTGTGTATGTTACTGTGGCATGAAGTTGTTTACACAATGTTGGGAATCAGAATTTCATCATGAATAGATCATTGGTTAAAATCGGTTGGCGCCAACCCATCAACTTTCAATTACACAATTGGTTAGAATTATATGAACCTAAGAATCATTAATTTTGAATTATAAGGACTATTCACCTATTGTCATGTACACTTTACAAACGGATAATTTTACCTTTATTAACTTTTTAATATTTTGTTTGTTTGTTGTATTCACATGAAAACAAACCCAGCATATTTTCATCAATTCCATCATCTAAACTGGATGAACAAATGCTGTTAACATTTTCCCACACAATTGATTATGGATGTTTGTAATCGATCATCACATTGGTGGAGCCAAAGTGATAATTTTCTATTATAATCGATCACTGGAACATTGCTATTACACATACATTTCGGCAGCGATCACTGGAACATTGCTATTACACATACATTTCGGCAGCGATCACTGGAACATTGCTATTA

Transcript

ctg449-0.1-1

Protein

Gene family

Gene family	Subfamily
Ubiquitin Family	ULD\|UFD/UBQ\|UBQ_Other
Ubiquitin Family	ULD\|UFD/UBQ\|UBQ_PIM
Ubiquitin Family	DUB\|USP\|USP

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF00443	UCH	Ubiquitin carboxyl-terminal hydrolase	Family	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR000626	Domain	Ubiquitin-like domain	Interproscan
IPR001394	Domain	Peptidase C19, ubiquitin carboxyl-terminal hydrolase	Interproscan
IPR018200	Conserved_site	Ubiquitin specific protease, conserved site	Interproscan
IPR019954	Conserved_site	Ubiquitin conserved site	Interproscan
IPR028889	Domain	Ubiquitin specific protease domain	Interproscan
IPR029071	Homologous_superfamily	Ubiquitin-like domain superfamily	Interproscan
IPR038765	Homologous_superfamily	Papain-like cysteine peptidase superfamily	Interproscan
IPR044635	Family	Ubiquitin carboxyl-terminal hydrolase 14-like	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR43982	UBIQUITIN CARBOXYL-TERMINAL HYDROLASE	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0004843	Molecular Function	cysteine-type deubiquitinase activity	Interproscan
GO:0005515	Molecular Function	protein binding	Interproscan
GO:0016579	Biological Process	protein deubiquitination	Interproscan
GO:0043161	Biological Process	proteasome-mediated ubiquitin-dependent protein catabolic process	Interproscan
GO:0061136	Biological Process	regulation of proteasomal protein catabolic process	Interproscan
GO:0070628	Molecular Function	proteasome binding	Interproscan

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID	Source
-	-	-	-	-	-

Expression pattern

1. Expression trend for ctg449-0.1-1 global RNA-seq network