Gene ID | Annotation | Chromosome | Start | End | Strand |
---|---|---|---|---|---|
ctg431-3.25-1 | TETRATRICOPEPTIDE-LIKE HELICAL | chr4 | 38472009 | 38494867 | + |
CDS | |||||
ctg431-3.25-1 | |||||
Transcript |
ctg431-3.25-1 |
Protein |
ctg431-3.25-1 |
Gene family | Subfamily |
---|---|
- | - |
Pfam accession | Pfam name | Description | Type | Source |
---|---|---|---|---|
PF08424 | NRDE-2 | NRDE-2, necessary for RNA interference | Family | Interproscan |
InterPro term | Type | Description | Source |
---|---|---|---|
IPR003107 | Repeat | HAT (Half-A-TPR) repeat | Interproscan |
IPR011990 | Homologous_superfamily | Tetratricopeptide-like helical domain superfamily | Interproscan |
IPR013633 | Family | siRNA-mediated silencing protein NRDE-2 | Interproscan |
PANTHER term | Description | Source |
---|---|---|
PTHR13471 | TETRATRICOPEPTIDE-LIKE HELICAL | Interproscan |
GO terms | Category | Description | Source |
---|---|---|---|
GO:0005515 | Molecular Function | protein binding | Interproscan |
GO:0006396 | Biological Process | RNA processing | Interproscan |
GO:0031048 | Biological Process | regulatory ncRNA-mediated heterochromatin formation | Interproscan |
GO:0071013 | Cellular Component | catalytic step 2 spliceosome | Interproscan |
GO:1902369 | Biological Process | negative regulation of RNA catabolic process | Interproscan |
KO | Enzyme | Enzyme ID | pathway | mapID | Source |
---|---|---|---|---|---|
- | - | - | - | - | - |
1. Expression trend for ctg431-3.25-1 global RNA-seq network |