| Gene ID | Annotation | Chromosome | Start | End | Strand |
|---|---|---|---|---|---|
| ctg422-5.4-1 | TRANSPOSON | chr9 | 79198787 | 79200454 | + |
| CDS | |||||
| ctg422-5.4-1 | |||||
| Transcript |
| ctg422-5.4-1 |
| Protein |
| ctg422-5.4-1 |
| Gene family | Subfamily |
|---|---|
| - | - |
| Pfam accession | Pfam name | Description | Type | Source |
|---|---|---|---|---|
| PF03184 | DDE_1 | DDE superfamily endonuclease | Family | Interproscan |
| PF03221 | HTH_Tnp_Tc5 | Tc5 transposase DNA-binding domain | Domain | Interproscan |
| PF13518 | HTH_28 | Helix-turn-helix domain | Domain | Interproscan |
| InterPro term | Type | Description | Source |
|---|---|---|---|
| IPR004875 | Domain | DDE superfamily endonuclease domain | Interproscan |
| IPR006600 | Domain | HTH CenpB-type DNA-binding domain | Interproscan |
| IPR009057 | Homologous_superfamily | Homeobox-like domain superfamily | Interproscan |
| IPR010921 | Homologous_superfamily | Trp repressor/replication initiator | Interproscan |
| IPR050863 | Family | Centromere and Transposable Element-Derived Protein | Interproscan |
| PANTHER term | Description | Source |
|---|---|---|
| PTHR19303 | TRANSPOSON | Interproscan |
| GO terms | Category | Description | Source |
|---|---|---|---|
| GO:0003676 | Molecular Function | nucleic acid binding | Interproscan |
| GO:0003677 | Molecular Function | DNA binding | Interproscan |
| GO:0005634 | Cellular Component | nucleus | Interproscan |
| GO:0043565 | Molecular Function | sequence-specific DNA binding | Interproscan |
| KO | Enzyme | Enzyme ID | pathway | mapID | Source |
|---|---|---|---|---|---|
| - | - | - | - | - | - |
| 1. Expression trend for ctg422-5.4-1 global RNA-seq network |
Maintained by Dr. Jiajie She in Longjun Wu's Lab & Pei-yuan Qian's Lab and supported by Southern Marine Science and Engineering Guangdong Laboratory (Guangzhou) & The Hong Kong University of Science and Technology
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