Gene detail

Detailed information of ctg400-4.24-1 in Gigantopelta aegis Gene info

Gene ID	Annotation	Chromosome	Start	End	Strand
ctg400-4.24-1	ACTIN-BINDING LIM PROTEIN	chr10	44225382	44283753	-

Gene Structure

More details in Jbrowse Sequence

CDS

ctg400-4.24-1

ATGGGTCAGAAGCCCGGGAAGCACAGAGAGGGTGAGGAAGATGGCCGATCATCACCACGGCGGTCCCCCAAACATTCTAAGCGTGGGTCCAAGACGTCGCGGACTTCTAGCCGTGAGTCGACGCCTCCCAACATAGAGGCTCTAGAACGGGAGCCGCGGGGAGGTCCACCGGTCCGGGAGATTGTCATAGAACCAAAGGAAACATCTCCATCACACACCGTGCCGGCATCAGCTCCCAAAACTAAATCACCAACAAAGGGCGAGAAGATGAAGTCCAAAGAGAAGAAGCCTGCAAGAGGCGAAGAGCAGGAAGTGCGACAGGTGGAAGAAGGCCCGGTGACCCCGGTGAAGCAGGACACGTCGAAGGTTGAACCGCTGACGCCTCTGATCATCAATGACAAGCCACAGGCCACGTCCACGCCATCGGCGCCTAATGGAGTCATCAGCACCGGGGTGCAGAATGGCAGTCCTCCACTGAGTCCTGACTCGGGAACTGACCACTCAGCGAGTGAAGATGAAGACGAGTTCACTCCAAATGACCAACAGTTTTCATTTCGAAGTACAAGTCCCACTAGTTCACTCACGTCAGCATCTACCAACAGTAGCGTCATTAGACACCGGCAGAATGGCTCCGGGTCATTGGAACGGAAGCATGAAGTGAACTTTGGCCGGTTCTACAATCAGAGCTATCTATCGAACGGGTCCCAGAGCTACATGAAGCGGGCCAGTCTGAATCCCACGGAGAAGAGTGAAAAGTTGAAGCCGGGATATCATCGACCTCCAAACTTTTCCTATTCTAAGGAAACACCAGATTTTCTGAAGGCCAAGAAAGGAAAGGGAATGATGGCTTTAGCCACGGGAAAGACTGTGATTAAGATCCGCCGGAGTGCCTCGCCTGCCGACTTGAAGAATGACGAGGCAATTAAACTGAGCATGTTCCCCGCGGGCAAGCCTCCTGAGCCGAACGAGATCGAGAAAATAGAGCGAGATGATTGGCCTGGGCCTGCGTCACCAGCTGCCTTACTGCCAGAAATCTTACGTGAGAGAAGACGAAGTCGTGGTGAGAAAGACGAAGACGATGATGAGGACGATTCTGAGGTGGAAGACCCGAGGATCCAGCGCGAGTTGGAGGAAATCTCAAAGATCAAGAACGAGTCGGGAATTGGTTCCGTTATCTACAAGGAACTTACAGAACGCAAGATTTTGCCACACAAACCCTTGGACCCTTGGAAGGCCTCTCGAGCTCCTAATGCCAAATATGAACCGCGGTATAGGACCAGATACCAGTCCCCCATGTTTGCGTCTCCAAAGCCTGGATATGGTCCTTCGTATGGCATGACTCCTCGGGCAGCCACTCTACCTCTTTCAGGCCTCTACGGCGCTAGAGATGACTTCGGCTATTACCATTTTGAGGAAGGTGAAACTAGTGGCGAGGGCCATCAAAGGTCAACACATACGTCATCTTCCACCGTCAATACAGATTCCAGCACCAGGCGAGAGGGTCGAGTGTGGGGTGTGACGGGAGCTGCAGGTTACGAGGGTCCATCTATATCACTGTTAAAACTACAGAAGAGCACATGGCACACAGAGGCTGAGCCACCAGTTTATTCCTATGAAAAATTAAAGATAACAAATTTCGATCTACCGAAGGATGTAGACACAAATCATCTAGAGATTCATTTAGCAGATACAGAATTTAATGACATTTTGGGAATGCCTAGAGAGAAATTTTACCGCTTAGCAGAGTGGAAGCGAAATGACTTGAAGAGAAAGCATGATCTGTACTAAACTCCGATGTTAACATACAGTTCGCCGAGACTATTCAGACGTTGCTAGCCTACTGACTGGAGCCTGGTGTTTGTGGTCGCCTTTGTGTGTTGCTCTTCATGTTTTGTGATTCGCATTCATAGAGTGAAGCAGGATCAGTGAAACGGTTACGTTGCTGGTTTGTACCAGTGCATAGACTTATAGTCACAGAGGCTTTACACACAAACACACAAACCATCCAGTCTGGACTCCTGAGCTGTTAGAGGCCCATCCTCCACTGTTCTAAGACTGAAAAAACATCAACAGTGGAGATTTTTTTTCCATAACTATGTCATTTGGATACAAATGTTCTGTACAAAGTAATAGACAAATGCACTCACATGGAATGGACTTGAGAGGTCTTGAACCTAGCTCTATGCCATTCTCTGACTGTTCATATAAACAAAAATGAATGTGAAATTTTAATGTTAATAATAATTTGTGGATCCAGGAATTGTATACAAATTAATAGAGCACTACAGATAGACTCAAAATATGGTCTAGCTTGGTATGTGGTGTTCTTTGATGAAACATTCAAATATTTTACGAAATCAGTAGTCTTTGGATCTATAAGTGACGTAAAATTCAGCACACAGTTTCTCAGACTTTACAGAACTCACAAAATAACCCAGGACTCCGTTGCAAAAGTAGTTCACTACTTGTTTCTGTACAGATTGGCTAAATATAAGAATGAAAAATTGCAATAGTTTTATACAACTTTTGCATGCATGAATGACTTGCCCAAAATAGTCCATAAAATAGTTGCTCTAAAAGTGTCTGAAGGGAAATCACGTCTAGTGTGAGCCCTGTAATAAAGAAGTAGCGCTCCAGACCGGAAACCGAGTGTGACATCAGCTTCCTTTCGTACGGTGCAGGTGTTCGAATAAAGACGGAGTGTGAAAGAAGATGATAGTTTTTTACTTATTTGATTTTCAGCCTTTGTTGCAAGTCCACCCAAGTTGATTTGATGTTAATTATTTATATGGATGTCATAGGTGTTGATCATAGTCATCTTTTCTTCTTTTTTTCTTTTTTTTTGTTCTGGTTGTGACAGAGACTTTGTTACGCTCATTTAGTTGTTTAAAAGGCTTCTTTTTTTTGTCCGTCCATCTATCATCATTAAACATATATAGTGATATTTAGGGGTTTTTTAATTGTGGATTGAAGTGATGAGAGGCCAAGCGGGGAGTTGTTGTTTAATAGCGCCCAAGTTGTGAAGTGTAAAATGTCATTGATGCGGTGCATAATCTGGGGCATGAGATAAAACTAGCTGTTTTTTCTTGTTCACTTGTTGGTTTTTCTGTCAACAGAACACACTAGAACCATTATCAGAAAATGTGTATTTCATTCTTTTTTTTTCAATTAGAAATTCATAGCAAACTCATCCTTTTTAATGATGTTTAAAAAAAAAAAAAAAAAACATACTTCTCACCTAGTTTACAAAATAAATTCTGTCCCTTTCATGCCATGACAGAGTTTTCATGAAAAATTATAAACAGAAAAAAAGACGCTATTGTAGATAAAATAGAACGAAACATTTTTGTTTTTAGAAAATGATTTTATGTAATGTTTATGGACTTGTTTCCAGTGTACTGTGATTCATCGGTTTTAATGCAGTATACTAATCACAAAGTGTAATAAGGTTTATTTAACTCAGATTGTTTTAATGCAGTATACTGACAACAGTATAACAAGTTTAACTAGTGTTTTCCATGTGTACCTACATGTATATAAATGTATGGCATGCTCCTTACATATTCAGTTTAACCTGTTGTTCATTTCATTCCAGACCTTTTGACACAAGCATGTCAAAAATTGGTGCAATACCTCATTTCACTGTGCTTTCTGTATTCAAATTCTTACTTTTATGAAGAAAGATATAATTAAATATTATATTATAATGGTGGTGACAGTTTTATTAGCCATTATAAATTAAAATGTAAAGAATGATATGAACTTTCAAAGAAACATATAAAAAAAACACTAACTAGAAGGTTCTAAAACAACAGCTTAAAATATGGGATTTGTGCAGTCTTCCAGGATAGGAAGAAACAACAAATCTATAGCTATGTAAATTTTTAATCTGTCTGAATTCCAAACGATTAATGAACCGAACTTCAGACACTTGACTTGGGGAAATGTTTAATATATAGAGCATTTTACAACTAGAAATGTTTGGAAGTCCTGCTTGTATAGACCCCCAAGTAGACCATGTCTGTACAGCACTGAGGTGAATTAACCATGTTGCTTGAACTGCAGGGATCATGTGAACAGACATCTCCCAAGAGAAATAGGCAGTCGGGATGCATCAGATTTTTAACATTTACTGAATATTGTTTTCACATACAAAAAATATATGTGCATCTGTCTACCTGTTGCATCTTATAAATACAGACATCCAACCGATTCATTTTTGTTTTGCATATAAAGGCATAATCTTTGTATGGTGCTGTAGATGATACTGCGAGAAGAGTGTTGAGGAGGCAAGCCCAAAATAGTTCATATTTACATGTATAAGCTGAAAATTGTCCATTAAGGCCATATTGGTGATCTGCAAATTACTAGCCTTTTATGAACAGATCTTAATGGCTCATATATGTGCAGCTTTCCGTAGCAGTCATGTGGTTGGGGTTATTTAAGGCTTCTTTTAAAACAGGTTTCATTAGAAATCATTTATCAAAAATCTAATTATTAAATTTATCTGTTATTTCTTGGTGCTGTTTGCGGTTATGTTTTAGGTTGTAACCAGAAAGTCACATAACATTCTGCAGAGCCGTA

Transcript

ctg400-4.24-1

Protein

Gene family

Gene family	Subfamily
-	-

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF02209	VHP	Villin headpiece domain	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR003128	Domain	Villin headpiece	Interproscan
IPR036886	Homologous_superfamily	Villin headpiece domain superfamily	Interproscan
IPR051618	Family	Actin-binding LIM	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR24213	ACTIN-BINDING LIM PROTEIN	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0003779	Molecular Function	actin binding	Interproscan
GO:0007010	Biological Process	cytoskeleton organization	Interproscan
GO:0015629	Cellular Component	actin cytoskeleton	Interproscan
GO:0030032	Biological Process	lamellipodium assembly	Interproscan
GO:0051015	Molecular Function	actin filament binding	Interproscan

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID	Source
-	-	-	-	-	-

Expression pattern

1. Expression trend for ctg400-4.24-1 global RNA-seq network