Gene detail

Detailed information of ctg4-16.5-1 in Gigantopelta aegis Gene info

Gene ID	Annotation	Chromosome	Start	End	Strand
ctg4-16.5-1	FGFR1 ONCOGENE PARTNER/LISH DOMAIN-CONTAINING PROTEIN	chr8	73965308	73971157	-

Gene Structure

More details in Jbrowse Sequence

CDS

ctg4-16.5-1

TATTTTTATATAGTTAATATTTTGCGGTATCAGCATTTAGGACCAAAACAATAAAATATTTTTTGGACGCAAATTAGACCTCCCTGTATTTTTCGGCGTTCCAAACAACGAAATGGCTAGTTTAGAAGAGTTGAAAGAAGTTTTGAAAGAAACTCTAGAGAACCGTGGAGTATTGGGTCAGGTCAAGGCCAAGGTGCGAGCTGAAGTGTTCAATGCCCTGGACGACCATTCTGAATCAAAGCCGCCATTGAGCAATGAGAATCTCCTCATTAACGAGCTTATTAGAGAATATCTCCAGTTTAACCAGTACAGATACACAGAATCTGTTTTAGTGTCAGAATCAGGAATGCCTAAAGTGCCTTTGGAAAGAGATTTTTTGACAAATGAGTTGAATGTTGTTGAAGACGGACCCAGTAGATCAGTGCCACTGTTGTACAGTATTGTAGCTCATTACGTGGGTCGTAATAATTCCTCAAACCACAAGTCACAGTCTCGGAGAGGCATTCAGAGATCTGCATTTATAGATAACCCCGAAGAGCGAAATTGTGATATCAATGGTGTCCTAGACATAGAAAATAAAGGCTTGGTTGTCCGTGGCGGGAAGAGATGATCAAAACAGCCCACATGTTTTTATGCTGAACTGTGATGGATAAATCTCTCATACACATTACCAACTTTTTTTGAAACATTTTTTAAAATAAAATCTCAGACATTTTCCTTTTCACAAACAGCACTAGGGGTAAGTGATTTCACATAAACATGTTTCGTTATTCTTTCTTTTGATCATCAGTAGAGATCACAGACATCTATAAGAGGTTCTGTCAGAAACGCAATTCATAATGTGCCTTAGTATAACATCAAACTGGACAAAAAACTGTCAGGTAATGGAGTTTCCAAACATTTTGTTTCAACATGAAAAATACAGATAAAAATGGACATAATTTTAGAATGCAACTCTGCAAAGTTATGGTTGAAGTGATCAGGGCTTGGTGAACTTGATCAGTCCTTGAGTTGAATACTTATATTGAGTTATGATTGTATCATGTTTTAGGTTTATCATACCAGGTATTGTAAAATGTAATTTCTCTTTTTTGATGTTTTGTTTACCTCATAATTGTAAATGTTGCAATAATCCATCTGGTACACCTATCAAATTATATTGATGTTTAACTGTCTTCAGGCTTATTACAGATAAGCTCTTTACACTGTGTTTTAATTTAACTTAAGAATTTTTGTATTGATATTGAACATTAATTTGTTTTACTCCCAATTTTTATACACCCATCTTTGAAGAGTCATATTCTGGTATGGCTTTGTTTATCCGCCTGTAAACTTTTTTTCGTTTCCAGAGCAAATCTTTCTTATCAATATATATATAGGATCATCAAACCTTAAGATGGGTGTGTCACATACCATAATTAGGTCACCATGGCCTACTTTCCATGCATTACTGCTTATTAAAGGAAATCCGTATCAATTCATTTAGGATCATCGAACCCCACATGCAAGAAAAATTTGGGATGGTGGTGTGCTGCATACCTTAACTGGGTCATATCGACCTTCTTTTGATGGGCCTATCATGTACCTCGCTGGTACTCTTGTTTGTGTTTGAGGTGTCGTTAAACATTCATTCGTTCATTCATTTACTCATTCAGTTTGTTACAGATAATCTTTAACAGAGAGGCAGGGATATAAAGACAGGATTATCTATCATTGGTCTCAGGGGTGTAGTGGTTAAGTCATCAGTCTTGAGGCTGATAGGTACTGGGGTCTTATTCTAGAACCGGTTCTCATCTAGAGTGAGTTTTAACAGCACAAAGGGGAGGTACAAGGCTGCTACACCAACTTCTCTATCCACTAACTGTTACCCCACTGTATGACCAGCCTCAGTGGTGTAGTGGTTTCATCTGACTTCTAGCTGGTAGGTACTCGGTTCGTGTCCCAAAACCGGTTCTCATCTAGAGTGAGTTTTAACAGCACAATGGGAAGGCACAAGGCTGCTACACCAAGTTCTCTAACCACTAACTGTTGCCCCACTTTATTATCCACGTGGTCCAACATAACCAAGTTAATAATAATCATATGAAGCACACATGTAATAAC

Transcript

ctg4-16.5-1

Protein

Gene family

Gene family	Subfamily
-	-

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF09398	FOP_dimer	FOP N terminal dimerisation domain	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR006594	Conserved_site	LIS1 homology motif	Interproscan
IPR018993	Domain	FGFR1 oncogene partner (FOP), N-terminal dimerisation domain	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR15431	FGFR1 ONCOGENE PARTNER/LISH DOMAIN-CONTAINING PROTEIN	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0005515	Molecular Function	protein binding	Interproscan
GO:0005813	Cellular Component	centrosome	Interproscan
GO:0005815	Cellular Component	microtubule organizing center	Interproscan
GO:0031514	Cellular Component	motile cilium	Interproscan
GO:0034453	Biological Process	microtubule anchoring	Interproscan
GO:0036064	Cellular Component	ciliary basal body	Interproscan
GO:0060271	Biological Process	cilium assembly	Interproscan

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID	Source
-	-	-	-	-	-

Expression pattern

1. Expression trend for ctg4-16.5-1 global RNA-seq network