Gene ID | Annotation | Chromosome | Start | End | Strand |
---|---|---|---|---|---|
ctg397-7.71-1 | NFAT | chr14 | 37724230 | 37746832 | + |
CDS | |||||
ctg397-7.71-1 | |||||
Transcript |
ctg397-7.71-1 |
Protein |
ctg397-7.71-1 |
Gene family | Subfamily |
---|---|
Transcription Factors Family | RHD |
Pfam accession | Pfam name | Description | Type | Source |
---|---|---|---|---|
PF00554 | RHD_DNA_bind | Rel homology DNA-binding domain | Domain | Interproscan |
PF16179 | RHD_dimer | Rel homology dimerisation domain | Domain | Interproscan |
InterPro term | Type | Description | Source |
---|---|---|---|
IPR002909 | Domain | IPT domain | Interproscan |
IPR008366 | Family | Nuclear factor of activated T cells (NFAT) | Interproscan |
IPR008967 | Homologous_superfamily | p53-like transcription factor, DNA-binding domain superfamily | Interproscan |
IPR011539 | Domain | Rel homology domain, DNA-binding domain | Interproscan |
IPR013783 | Homologous_superfamily | Immunoglobulin-like fold | Interproscan |
IPR014756 | Homologous_superfamily | Immunoglobulin E-set | Interproscan |
IPR032397 | Domain | Rel homology dimerisation domain | Interproscan |
IPR037059 | Homologous_superfamily | Rel homology domain (RHD), DNA-binding domain superfamily | Interproscan |
PANTHER term | Description | Source |
---|---|---|
PTHR12533 | NFAT | Interproscan |
GO terms | Category | Description | Source |
---|---|---|---|
GO:0000978 | Molecular Function | RNA polymerase II cis-regulatory region sequence-specific DNA binding | Interproscan |
GO:0000981 | Molecular Function | DNA-binding transcription factor activity, RNA polymerase II-specific | Interproscan |
GO:0003677 | Molecular Function | DNA binding | Interproscan |
GO:0003700 | Molecular Function | DNA-binding transcription factor activity | Interproscan |
GO:0005667 | Cellular Component | transcription regulator complex | Interproscan |
GO:0006355 | Biological Process | regulation of DNA-templated transcription | Interproscan |
GO:0006357 | Biological Process | regulation of transcription by RNA polymerase II | Interproscan |
GO:0008134 | Molecular Function | transcription factor binding | Interproscan |
KO | Enzyme | Enzyme ID | pathway | mapID | Source |
---|---|---|---|---|---|
- | - | - | - | - | - |
1. Expression trend for ctg397-7.71-1 global RNA-seq network |