Gene detail

Detailed information of ctg392-2.22-1 in Gigantopelta aegis Gene info

Gene ID	Annotation	Chromosome	Start	End	Strand
ctg392-2.22-1	PCNA-ASSOCIATED FACTOR	chr15	44778584	44784875	+

Gene Structure

More details in Jbrowse Sequence

CDS

ctg392-2.22-1

TCCGAATATCGCAAATACAGAACGTCGGCTAGTTCCGTACATTTTGGCGGGAAATCTAGTGTCATTACAGAGCGCCAAAATTCATGAGTACGATATAAAACAACTAAACTATTTTGTTTTACTAAGCCTGTAATTTACACGATGGTGCGAACGAAAGCTGACGGGTGTGCGGCAACTAGAAAGGTTGTCGCTGCTCGTGCTCCAAGGAAGAGTTTAGGAAGTTCCAACTCTGCGTCTGGCAGCAGCAGTTCAGGAGAATCGCCCGCGGGTAAAGGTAAATTTGCGGGAGGTAACCCGGTGTGTGTGCGACCGACGCCCGAGTGGCAGAAGGGGATTGGAGGGTTTCTCGTAAAGAAGACCAATGACGACAAAGAAAACGTAGAGACGGAAGAAGCTGCCTCTGGGTCATCCAATCACGTCGAGTGTGTTGAAGAAACATCGGGGGCATCAGGATCCAGTAAAGATGACTGAGTCTGTGTCTACCTGAGAACTGTGTATAATGAAAAGTACTGTATAGAAACTACAACCAGCTCTTCCTTAGGAGGATTTCAACTGATCACTCCGTTTGGAAACGTGTTTGCCACTGCCAACCTGTATATACGTTGTTGTGAATTGAGTTATAAAATTTTCATTTGTGTGAATGAGTAGTTTATCATTAGAGCCCAGTGAGAAAGTACTTTTGTATATGTTGATCACGTGTCCTTATTGTGCGAGTGTTGGAAGCTAAATGTGTTTGTAGCCTAAGAGATTATTCGTATAAACGATTCAAGGATTTGGTACTAGAATAAATAAAATAATAAATTCAAGATTATAATATGTAAAGTGCATATTTATTTAAAATATGTTTTGAAATATATTAACATATTCAAGTTATTGATTGTACTTAAAATAACAAAGATACAAAACTAATGAAGTAAGCACTATTTCAATTTACAACCATTGCATCTCATGCAAAACTGCAAAAAGTACCGAAGGACAAAAAAGAAAGATACATATTTTGTTCATAATGCATTTGAGTAGTTTATTAACTGTTTGGTATACTTCCTGGTAGAGTAAGTTATTATAAGTGATATCTCAGGTTAATACACAATTTTAAAAACTCAACCTAGTGCTGTTTTAAGTATTTGCAGTATGATTTATCTAAAGTAATTATGAAAAGAAATATCTATCAATACCAATTTCTTTGTCATGAAACTAACAGAAAATTGGGGGGAAGGGGGCATAAATATATACTCGTTGAGGAAAGAAGTTCCTATGTAAGTATTACACACTGTATATATACATGGGCGTATGGGGACTCTTTGATTTAGGGGGGCTGGAGGGGTTGATTTGCTCGAAATTTTACCCAGATAAAAACTGCCCGAATTTTCCCCACTGTTTTGCCCGAATTTGGGGGGGCAATTGCCCCCCTTCTCCCCCAGATCGTACGTACATATACTATAGGTCCTTGAATACAAGTCTAGGCTTCTCTTTTTTTCGTGATACTCTGAAACCTGGCATCTATTCAAGGCAGGCTTCTGGGTGTGTTTTTTTCCATGCAAAATGTTCATACATATCAGTACTTTTCAAGAATGACCAAGTCTGTTGCCTATCTCAGATCCTTTTGCTTAAGAGACTGTGTGATATTGAAGATGTACACTTGTATGACATAACTTTCCTGTTTTTGCAATGCCATTATATTTTTTTTTACATTGTTAAACAGAAGTGAAGAATATAATGCAGTCATTAACCTGACAAAGCTATGTACAATAGAAGAAATAGGCCTTTATGTAATACTAAGGTATTTGAAAACACAAAGTGTCAATTGGAACAAGAAAGCAGGTCTCTAATGAAGGATTTGCGGTATTTACAAAATCTGTTTGTCTTACTATTAGGGGCCCAGTGGTAAAGCACTCGCTTGATGTGCGGTCGTTTTGGGATCGATCCACGTTGGTGGGCCCATTGAGCTATTTCTCGCTCCAGCCAGTGCACCACGACCGCTACATCAACGGCCATGGTATGCGCTATCCTGTCTATGAGATGGTGCATATAAAAGATCCCTTGCTGCTAATCGAAAAGAGTAGCCCGTGAAGTGGCGACAGCGGGTTTCCTTGCTCAATATCTGTGTGGTCCTTAACCATATGTCCAAGGCCATATAACCGTAAATAAAACGTGTTTAGTGCGTCGTTAAATAAAACATTACCTTCCTTACTTTGTCTTACATGTGTGTATCTACATACCTTTACAATGCTGAAACGCTCGTCTTTTCTCAAAAACAGACTTCATAAATTTGGGTGGAAATTATTTTGCAAAATAATAAATTTCAACCATTTACAAACTTTGTTTTAGACAATTTTATTTGGTGCATAGGAACTTTTTTTTACTACAAGTTGTATTCAAAATAAAACAAAGAATGCAAGTTACATGAGAGACATGTTTCAGATGTAGAATTGTAGACATGTTGAAATTCATTCATTGTATGAAAGATGGAAGATAGTTTAACTGCGAGTGAGTGGTTGATTTGAGGTACATTTTGAATGTTTGTGTACAAAAAATGATTTATTGGAAACTTTTACTCCCATTACTGGTGCTTTTTGTACATAATAAAATATTAATTAGTACAAATGTCTTTTGTATTGTTTAACTTATATAATATAGGCCAAACATGTCACTTAGGTGGGGGTAGACCGAATATTTCTGTCTGTAAAGCTTTATTTCATATTAATGATTTGTCTTCTTTATATTTATATCAACATATGATATGCAGGGTGGGGTGGGGTGGGGTGTTCTTGAAAATTGCAAGAAGTCATTTCGTGAGCATATTAAAACCCCC

Transcript

ctg392-2.22-1

Protein

Gene family

Gene family	Subfamily
-	-

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF15715	PAF	PCNA-associated factor histone like domain	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR031444	Domain	PCNA-associated factor, histone-like domain	Interproscan
IPR040444	Family	PCNA-associated factor	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR15679	PCNA-ASSOCIATED FACTOR	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0003682	Molecular Function	chromatin binding	Interproscan
GO:0005634	Cellular Component	nucleus	Interproscan
GO:0006974	Biological Process	DNA damage response	Interproscan
GO:0019985	Biological Process	translesion synthesis	Interproscan
GO:0051726	Biological Process	regulation of cell cycle	Interproscan

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID	Source
-	-	-	-	-	-

Expression pattern

1. Expression trend for ctg392-2.22-1 global RNA-seq network