Gene detail

Detailed information of ctg389-3.31-1 in Gigantopelta aegis Gene info

Gene ID	Annotation	Chromosome	Start	End	Strand
ctg389-3.31-1	60S RIBOSOMAL PROTEIN L18	chr8	59428406	59440005	+

Gene Structure

More details in Jbrowse Sequence

CDS

ctg389-3.31-1

TTTGAGCCTCTCCTTTTAGTGTTTTAATTATTATCCTCATTAATTGCTTTAGATAAATTTAATACATTTTGTTGTTGGCAATTTATTTATTTGTAATTGTATAATTACTTATGGATTGTATTTCGTGCGTTTTGGACGAATTGAAAGTGGGTTGAAAATAAAATATAGCGTTTGAGTTGTCGACGTGTTTACTTTGCATTCCACGAGTTATCTCCCTCAACTTCCTTTTTTCCGGTTCCTCCATAATGGGTATAGATATATGCCACAAGTATGACCGTAAGGTCCGACGGACAGAACCTAAAAGTCAAGACATTTATTTGAGACTTTTGGTCAAACTTTACAGATTCTTGGCCCGCCGAACGAATGCCAAGTTTAACAAGATCATCCTGAGAAGGCTTTTTATGAGCAAAACTAACAGGCCACCATTGTCCCTGTCTAAGCTGACTCGTTTTATGAAGAAGCCAGATCGTAATGGAAAGACCGCTGTAGTAGTTGGCACTATTACCGATGACGTGCGCCTCATGCAGATACCCAAGATGAAGATTTGTGCTTTGAAAGTGACTGAGCGTGCCCGCGGCAGGATCCTGAAGGCTGGAGGCAAGATTATAACATTTGATCAGCTTGCAGTGAAGGCGCCAAAAGGACAGAACACTGTTCTCATTCAGGGTAACGACGGTCATAACTATTTCACTGTTCTCATTCAGGGTAACAACGGTCATAACGATTTCACTGTTCTCATTCAGGGTAACGACGGTAATGACGATTTCACTGTTCTCATTCAGGGTAACGACGGTCATGACGATTTCACTGTTCTCATTCAGGGTAATGACGGTCATGACTATTTCACTGTTCTCATTCAGGGTAACGACGGTCATAATTATTTCACTGTTCTCATTCACGGTAATGACGGTCAAATGATTTCACTGTTCTCATTCAGGGTAACGACGGTCATAACTATTTCACTGTTCTCATTCAGGGACCGCGGAAGTCCCGTGATGCCTACAGACATTTTGGCCGTGCTCCTGGCGTGCCACACAGCAGCACTGCCCCATACGTGCGTTCGAAGGGCAGGAAGTTTGAGAGAGCCCGTGGACGTAGACACAGCCGTGGTTACAAGAACTAAAATCTGTTATGTTGAAAAAGACACTGCAGAAATAAATGAAGAATGAACGCAGCAATGTTTGCTTTGTTGAGTTTTAATCTCGTTAAATATACCACGACTGGTATATTTAAGGCTGTGGTATGTGCTATTCTGTCTGTGGAGTGGTGCATATAAAAGATCCCTTGCTGCTAATGGAAAAACGTAGCGGTTTTCCTTTCTAAGAGGATGGGACATAGACGAGTGGTACAACATTCACTTGATGCGCGGTCTGTCTGGGATTGATCCCTGTTAGGGGGGCCTATTGGGCTATTTCTCACTCCAGCCAGTGCACCACGACTGGTACATCAAAGGCGGTGGTATGTGCTATCCTGTCTATGGGATGGTGCATATAAAAGATTCCTTGCTGATGGATAATCGAAAAGAGTAGCCCATGAAGTGGCAACAGTGGGTTTTCTCAATAACTGGTCCTTGACCATATGTCCGATGCCATATAACCGTAAATAAAATGTGTTGAGTGCGGCGTAAAATAAAACATTTCCTTCCTTCCTTTCTAAGACTCCGAATTACTATATGTTTGACATCCGATAGCTGGACAGGCGGCGTGGTTAGGCCATTGGTCAACAGGCTGGAAGGTACTGGGTTCGGATCCCAGTCGAGGCATGGGATTTTTAATCCAGATACAGACTCCAAACCCTGAGAGTGCTTCGCAAGGCTCAATGGGTAAGTGTAAACCACTTGCCCATAACTGGTTCAACAAAGGCCATTGTTTGTGCTATCTTGCCTGTGGGAATCACAAATAAAAGATCCCTTGCTGCTAATCCGAAAGAGTAGCCCATGAAGTGGCGACAGTGGGTTTCCTCTTAAAATCTCTGTGGTCCTTAACCATGTCTGACGCCATATAACCATAAATAAAATGTGTTGAGTGCGTCGTTAAATAAAACATTTTTCTTTTTTTCCCCCTGATGGCTGATGATTAATAAATTGGTGCTCTTAATGGGGTCGTTAAAACAAACTTTTTGTTGAGTTTTAAATGTTTTATTTAATCAGAATTTTTCACATGCATTGGATGAAAAGGTTTTCTCTTTATCTCACGCTGTATAAAACCAAGTTTTACAATAACTTTTTCACCAAATTTTTCTTGAAATGTGTTCTGGTGGTGTTACATATTGTTCTATTTTGATTGTCTAAAATACATGTGCTGAAAAAAATTAGTTTGGGTAGTCTTTTAAAAAAAGAAAGAAAGAAGGTATTTATACTACATTCACCCTTGCAGGCCCAGTTAAAATGTTATGTATATACTTTTTCACATACTTTTTTTTTTTTTTTTTTTAAATTCTGTTTCCGAAAACATTTTTGTGGTCCTTGCTGAACCTTTTTCACATAATATTCCATAAACAAACTATGGTTGATAATTTTTCAATTTACAGCCATTGCATCTAATTGATGGATTAATGGGTAAATGATAACATTAGAGTATCGCTCTTTACTAGACCCATTTTAATTGTGGTATGTACTATCCTGTCTGTGGGATGGTGCATATGAAAGATCCCTTGCTACTAATATAAATGAGTAGCCCATGAAGTGGCGACGGTGGGTTTCCTCTCTTCATCTCTGTGTTCCTTAACCATATGTCCGACACCATATAACTGTAAATAAAATGTGTTGAGTACATCGTTA

Transcript

ctg389-3.31-1

Protein

Gene family

Gene family	Subfamily
-	-

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF17135	Ribosomal_L18	Ribosomal protein 60S L18 and 50S L18e	Family	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR000039	Family	Large ribosomal subunit protein eL18	Interproscan
IPR021131	Domain	Large ribosomal subunit protein uL15/eL18	Interproscan
IPR021132	Conserved_site	Large ribosomal subunit protein eL18, conserved site	Interproscan
IPR036227	Homologous_superfamily	Large ribosomal subunit protein uL15/eL18 superfamily	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR10934	60S RIBOSOMAL PROTEIN L18	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0003723	Molecular Function	RNA binding	Interproscan
GO:0003735	Molecular Function	structural constituent of ribosome	Interproscan
GO:0005840	Cellular Component	ribosome	Interproscan
GO:0006412	Biological Process	translation	Interproscan
GO:0022625	Cellular Component	cytosolic large ribosomal subunit	Interproscan

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID	Source
-	-	-	-	-	-

Expression pattern

1. Expression trend for ctg389-3.31-1 global RNA-seq network