Gene ID | Annotation | Chromosome | Start | End | Strand |
---|---|---|---|---|---|
ctg3690-0.0-1 | E3 UBIQUITIN-PROTEIN LIGASE CHIP | ctg3690_pilon_pilon:::debris | 2933 | 10292 | + |
CDS | |||||
ctg3690-0.0-1 | |||||
Transcript |
ctg3690-0.0-1 |
Protein |
ctg3690-0.0-1 |
Gene family | Subfamily |
---|---|
- | - |
Pfam accession | Pfam name | Description | Type | Source |
---|---|---|---|---|
PF00515 | TPR_1 | Tetratricopeptide repeat | Repeat | Interproscan |
InterPro term | Type | Description | Source |
---|---|---|---|
IPR011990 | Homologous_superfamily | Tetratricopeptide-like helical domain superfamily | Interproscan |
IPR019734 | Repeat | Tetratricopeptide repeat | Interproscan |
PANTHER term | Description | Source |
---|---|---|
PTHR46803 | E3 UBIQUITIN-PROTEIN LIGASE CHIP | Interproscan |
GO terms | Category | Description | Source |
---|---|---|---|
GO:0000209 | Biological Process | protein polyubiquitination | Interproscan |
GO:0005515 | Molecular Function | protein binding | Interproscan |
GO:0005737 | Cellular Component | cytoplasm | Interproscan |
GO:0006515 | Biological Process | protein quality control for misfolded or incompletely synthesized proteins | Interproscan |
GO:0030018 | Cellular Component | Z disc | Interproscan |
GO:0043161 | Biological Process | proteasome-mediated ubiquitin-dependent protein catabolic process | Interproscan |
GO:0045862 | Biological Process | positive regulation of proteolysis | Interproscan |
GO:0051087 | Molecular Function | protein-folding chaperone binding | Interproscan |
GO:0061630 | Molecular Function | ubiquitin protein ligase activity | Interproscan |
GO:0071218 | Biological Process | cellular response to misfolded protein | Interproscan |
KO | Enzyme | Enzyme ID | pathway | mapID | Source |
---|---|---|---|---|---|
- | - | - | - | - | - |
1. Expression trend for ctg3690-0.0-1 global RNA-seq network |