Gene detail

Detailed information of ctg367-5.2-1 in Gigantopelta aegis Gene info

Gene ID	Annotation	Chromosome	Start	End	Strand
ctg367-5.2-1	AP-5 COMPLEX SUBUNIT MU-1	chr4	76064786	76082805	+

Gene Structure

More details in Jbrowse Sequence

CDS

ctg367-5.2-1

AAACGAAAGTACATTCATGATTCAGTTTGATGTTTTGTAGTTTATGTTTTAAGTCAATTTTGTACTATGGTTTAAGCGTATCTTTACATTACATTGACTATGAGTCTTAGAGCATTGTGGGTTATTAAATTGTCTTCAACCAGAAAAGAAAAATGCCTGTATTTTAGAAAATTCCCAACATCTGAAAAAAAGGCAAAAACAATTGACGGGGATGCATATGTGCCACTGCCGCAGACAGAATACTTCATACAACTACTGTTAACAGAAGTCCGACTCTCAGCAGCGAGCTCAAAGTTTATTGTGGCCCGTGATACCTGTAGCAAAGAAGATGAAAAGCCAGTATTTGAGTTGGAAACGTCAGCAGGAAAACTGTGGCCAATTGTTGTTATACAACAGTATGGGTTGCTGCTGTGCTGCTTGCCTCTTGTAGAGCAGGGCTCTCAGAACAAGCCACCACTTGTTCACATTCCATCTGTATCCTTGGGATTCTCATTGCTATGTGGAATCTCTGACTTCCTTCGAACACAGACCAGCCAGGAGTTTGCATCAAGACTTGCTGAGCTTCCAGATTTTATCAATGAGGCTGCACCATTTGGTATTCCTAGAGACACATGTAGTGATACGGTTTTAGCTAAACTGGCTAACAAAGTTCTCTCAGTGCCAAAATCACAAAAGCAACCTGCATGGAAGCCAGTGCTGTACAAAGGGAAGGCCTGCATCTATCTGGCAGTGTCCGAGTGTATCAAGGCTGCACAGTGTGAACAAGGTGAGCTGCAGGATTTCTGGGATGTGTACGGCTCCATCATATGCAAGGCTGATCTGGAGGGTGCCCTGCCGGACATCACACTGAACATTTCACACCAGAGTGACGTAGACTGTGTGCCACTGGATCATCTCACCATACACCCGTGTGTACAGAGTGCCGACTCAGCAGAGCTTGATACAGTTGTTTCGCGAGATAGCGTTCCATCTCGCAGAATTCGGTTTACGCCTCCAGCCGAGATGTTCACTCTGTGTCACTACACAGCTTCCCGTCTGCAGGAACTGCCAATATTCGGAGTCTATCAGATGACTTATGATTCAAGAACTGCCAAATTTAATGTCAACCTCAAGTTGAGTGACCAGATTAAGAACAACTTTGAATATTGTGAGCTGCAGATTCCATTTTATAACAGAGGTGTTATATCCAGTTTTGAAACGACGCCTTCTCAAGGAAGTACCAGTCTGTCTCCAGACAAGAACATTGTCGTGTGGAATGTTGGTCAGAAGTTTCCCAGTAAGACACTGGAGGTTTCCATGACAGCAATTGTCCATTTTAGTGAGACAACATCCACTCCACTGTCATCGGCAGAGGAACTCTTCTGTGTTGGACAAAATGGATATGCTCAACTCTACTTCAAGATTCCTGAGTTTACACACACAGGTTGTTACATAGATCCGAAGTCTATCCAGGTGTCTCCAAGTACAAAGTTCAAGTTAACAACAGTTCGCGAGTATTTCTCAACTGACTACAAAATCTGGAACTCCTATGGAGACACCCTTACAACTGCTTCCAGAAAGTAGTGAAATCAGCAGTGAAATCAACACAGTTATTGGTAGACCATGGACAAACTTCATAACTTTAACATTTAATTCAGGCCCTAATCTAGAATTGGAAAAAGTAGGAGAAATGACTTTTTCCTTCCCAGAAGAAAGGAGAGAAGTGTGTGGTCAAAATAGGCAAAGTTAACATTTATCGGTACATTTCGTAGTACTTCATCATTTTCCACGTTCATTCAGAAACTACTACTCAAAAACAAAACAATTGAATATTTTCATTAAAAACACAATACTGTTAAGTTACTGATAATAAGTATGTAGCCGTTTTGTTAAAATGAACATAACAAATCACATTTTCTGGCATTACTGAAAAACATTTGGATGAAAGAATTAGACAACACTTAACTGGTCACTGCAAATGGTGCTCCATCGGACATGCATTGTTGTTTGGTTTGGTGCCAATACAACAGACTGACC

Transcript

ctg367-5.2-1

Protein

Gene family

Gene family	Subfamily
-	-

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF00928	Adap_comp_sub	Adaptor complexes medium subunit family	Family	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR028565	Domain	Mu homology domain	Interproscan
IPR036168	Homologous_superfamily	AP-2 complex subunit mu, C-terminal superfamily	Interproscan
IPR039591	Family	AP-5 complex subunit mu-1	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR16082	AP-5 COMPLEX SUBUNIT MU-1	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0005764	Cellular Component	lysosome	Interproscan
GO:0005770	Cellular Component	late endosome	Interproscan
GO:0005829	Cellular Component	cytosol	Interproscan
GO:0016197	Biological Process	endosomal transport	Interproscan
GO:0030119	Cellular Component	AP-type membrane coat adaptor complex	Interproscan

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID	Source
-	-	-	-	-	-

Expression pattern

1. Expression trend for ctg367-5.2-1 global RNA-seq network