| Gene ID | Annotation | Chromosome | Start | End | Strand |
|---|---|---|---|---|---|
| ctg347-0.4-1 | CCR4-NOT TRANSCRIPTION COMPLEX SUBUNIT | chr6 | 44975325 | 44983215 | + |
| CDS | |||||
| ctg347-0.4-1 | |||||
| Transcript |
| ctg347-0.4-1 |
| Protein |
| ctg347-0.4-1 |
| Gene family | Subfamily |
|---|---|
| - | - |
| Pfam accession | Pfam name | Description | Type | Source |
|---|---|---|---|---|
| PF04857 | CAF1 | CAF1 family ribonuclease | Family | Interproscan |
| InterPro term | Type | Description | Source |
|---|---|---|---|
| IPR006941 | Family | Ribonuclease CAF1 | Interproscan |
| IPR012337 | Homologous_superfamily | Ribonuclease H-like superfamily | Interproscan |
| IPR036397 | Homologous_superfamily | Ribonuclease H superfamily | Interproscan |
| IPR039637 | Family | CCR4-NOT transcription complex subunit 7/8/Pop2 | Interproscan |
| PANTHER term | Description | Source |
|---|---|---|
| PTHR10797 | CCR4-NOT TRANSCRIPTION COMPLEX SUBUNIT | Interproscan |
| GO terms | Category | Description | Source |
|---|---|---|---|
| GO:0000932 | Cellular Component | P-body | Interproscan |
| GO:0003676 | Molecular Function | nucleic acid binding | Interproscan |
| GO:0004535 | Molecular Function | poly(A)-specific ribonuclease activity | Interproscan |
| GO:0030014 | Cellular Component | CCR4-NOT complex | Interproscan |
| GO:0030015 | Cellular Component | CCR4-NOT core complex | Interproscan |
| GO:0043928 | Biological Process | obsolete exonucleolytic catabolism of deadenylated mRNA | Interproscan |
| KO | Enzyme | Enzyme ID | pathway | mapID | Source |
|---|---|---|---|---|---|
| - | - | - | - | - | - |
| 1. Expression trend for ctg347-0.4-1 global RNA-seq network |
Maintained by Dr. Jiajie She in Longjun Wu's Lab & Pei-yuan Qian's Lab and supported by Southern Marine Science and Engineering Guangdong Laboratory (Guangzhou) & The Hong Kong University of Science and Technology
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