Gene detail

Detailed information of ctg324-4.25-1 in Gigantopelta aegis Gene info

Gene ID	Annotation	Chromosome	Start	End	Strand
ctg324-4.25-1	MITOCHONDRIAL 28S RIBOSOMAL PROTEIN S6	chr4	32122509	32126058	+

Gene Structure

More details in Jbrowse Sequence

CDS

ctg324-4.25-1

ATGGCATTTCAGCCAGAGCTGGCTCAGACAATACGCAGGACATGCGAGAACATTATGACGCGTGGCGGTATCATACAGAAGATGGAAAATCTCGGTTTGAAGACCCTACCTTATAGAATGGTATCGCATGGAACCAGAAATGCTGAAGGAAACTACATTCTGATCAAGTTTGACGGACGGACAAATTCAATAATGTCAATTGAAGACGAGCTGAAGCGAGATGTGGACATAATAAAACCTAACATCTTCAGAGAGGAAGAAGAATTTGTACGACCCTGTTCAAAAGGACCGTGTGTGTTTGGTGAACTTCCAAATCCAGATCATGAAAGGAGAGTTTGGAAACGAAAAGCACTGAAAAAGCTTAGATACACCAAAGGAGAACAAGAACAATTAATGTGAAAGAACTTTAAAGCACCTGATAAATATGTGTAATAATACCATTAACAACTGTTTAACTGTATATCTGTGTGTGTTTGTGTGTCTTGTGTGTTAGTTACTAGGGAGAGTTTATCATCTAACATTACAGAGATGCAAATCTATAATATGATACCATGTGCAAGGCATTTTTAACAGTTTCTGATCGTTCTGATTGCTCCTCATCTTTTGATCTGTAGTGCTGACTGCCTTCTTTGTACTTACCAGGGGCCTAATTCACTAAACTCTCGCAACTTTGTGATCTCGCAGTGCAATGCTAAAACACTTAAAAAGAGGATGCTTTGTTGTCTAGCAGAACCTAAGAGAGCTTTGTGAATTACTGGTAGGCCCCTGGCTCCGTATTCATAAACGTACTTAAGTCAATGTATGATACCTAAATATATACTTAAAGTACATAGATAAGTATCATACATTGACTTAAGTATGTTTATGAATACGGAGCCTGATGACAAACTTTGCAAGGATCTTTTTGCACTCGGGTCCTGTCGACTATCGTACACACATTGTGCTAAATATTGCATACAAAGGTGAATTTCATAAATAAAACCTAAAAGAATGCCACCATCTTTTGTCACTTAACATAGAAGTGGCTATCAACACAGCCCACTGTAAGGCCACCACACCCCATCTAAATTTCTAGTAGTTTCATCTAGCATAGTATAAACTAGAGCTGGCCGGTATTGAGATTTGAGGTTTGGTATCGATATCAGTATTATAATTTACCTTGGTATCAGTACAGTATTCGGTATAAACACAATACCAATACCAATGTTGAGTGGTATTTTCGGTATACTCTGCTTTAAATGCATGCCTCAATTGAGGCTTGCCTGCTAATTTCATCTAAATAAAATTAAATTCCATACACAAGGCTCTCTTCTGATTTATACCCAACCCATTTTGCGTTCGTCAGATATATTGTTAGTGATATACTAAATGACGGGAAACATTTTTCATGACATGATACCAATACCAAACGGCATACCCTCCAGCTCTAGTATAAACGTGTATATGTAAATGGTATTATACAAAAGGAATCCATGTCAAATAATATATGCTGGGGTGAAATGTAATTCAGTGGTAGAGCACTTGCCCAAGGTATGATGGGTTACATGATCAATTTCCCTCTTTGAATTAATTTTTCACATCCCCAGCAGCACCCCACAACTTGTATATCAAAGGCTGTGGTTGGTACTGTTCAGTATTTGGAAAAATGTATAAAAAAGAGCTCTTGCTGATTTTTGGAAGGAACACCCTGTGTGGTGACAGCAGGTTTTGTCTAGTCACGGGTGATTCATGTTACAAGAAAAGTGGCTTTAAAAACCACAAGATGATAAGGATACCTTGATAACCGGTGTTTTCAAAAGTGTTAGATATCTGAGTGTTTACATGTTTAAAACATGACAAGAACTTGTGTGAGTTGCATATACACAGTTGACAATAAACACATTTTTATTATTATGAAGTAGTTGTGTTAATTTTATATAAGTGGTTGTCAAACCGGGGAACATTTTGTTTAGTATCGTGTCACGATTCACATTAAAAGTTTGGTTCACAATTTTAAAACATAAAACTAATGTTGGTAATAAATTTTTAATTGACCAGAAATGTGCCTA

Transcript

ctg324-4.25-1

Protein

Gene family

Gene family	Subfamily
-	-

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF01250	Ribosomal_S6	Ribosomal protein S6	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR000529	Family	Small ribosomal subunit protein bS6	Interproscan
IPR014717	Homologous_superfamily	Translation elongation factor EF1B/small ribosomal subunit protein bS6	Interproscan
IPR035980	Homologous_superfamily	Small ribosomal subunit protein bS6 superfamily	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR21011	MITOCHONDRIAL 28S RIBOSOMAL PROTEIN S6	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0003735	Molecular Function	structural constituent of ribosome	Interproscan
GO:0005763	Cellular Component	mitochondrial small ribosomal subunit	Interproscan
GO:0005840	Cellular Component	ribosome	Interproscan
GO:0006412	Biological Process	translation	Interproscan
GO:0019843	Molecular Function	rRNA binding	Interproscan
GO:0070181	Molecular Function	small ribosomal subunit rRNA binding	Interproscan

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID	Source
-	-	-	-	-	-

Expression pattern

1. Expression trend for ctg324-4.25-1 global RNA-seq network