Gene detail

Detailed information of ctg316-2.1-1 in Gigantopelta aegis Gene info

Gene ID	Annotation	Chromosome	Start	End	Strand
ctg316-2.1-1	PROTEIN SON	chr4	5955307	5975992	+

Gene Structure

More details in Jbrowse Sequence

CDS

ctg316-2.1-1

ATGGGTGTGCGACAGACTTTGGACACCAAACATCGATCTTTTCGCCACACGATTCAACCATCAGCTGAGGGTTTACGTGTCTCCGGTGCCGGATCCCGAAGCTCTGGATCTCGATGCATTGGCCATCAGCTGGGAACAGATGGACGCGTACGCTTTTCCTCCACCAATCCTCCTTCCAAGGGTGCTTCAGAGGTTTCAGCTGTACCATTGTCGCCTGTTGCTCATTGCTCCGATGTGGCCATCCAGGATGTGGTATCCAGATCTAATACGTCTGGCCGATCCACATCCTTTACCGCTGCCAGACTGGGATCATCTGTTGCTGCATCCCACGTCAAGACTGTACCATCCACGTCCGCAGTTGTTCCAACTGCACGCGTGGACTTTATCTCCAAGAGTTTGAGGAAGAAAGGTTTTTCTTCACAGTCTACGGCGGCCATTTTTAAAGCGCACAGATCATCTACTACTGCGGCTTACAACGTCAGATGGCTTTGCTTTCACCGATGGTGTGTTAGAAAAAAACTCAAACCTCAGACGATACAGATACCTCGTCTTGCTGATTTTTTGCTGTATCTGCGGACCACTTTACGATTGAAGGGGTCTACCATCGCTGGGTACGTTTCGGTCATCGCTACTGTTCGTGATGTAACTACTGGAACGAAGTTATCGGGTATTCCTGAGATCCATAAAATGATCAAAGGTTTTCGCCTTGAAGATCAAGTACACCGGTTTCGGCCACCAAGATGGGACCTGAATTTGGTGTTACGAGCGTTATCGACCGCACCTTATGAGCCGATCGAGTCCTCTTCCCTGCAAGATTTGACACGGAAGACGGTGTTTTTACTCGGTTTCGCCACGGCTGCTCGTGTCTCAGAACTTCATGCTCTTGATGTCGATTTGGTACGTTTTCACCGAGATCGGCGTGCAGTCAACTTGGGGTTACTCATGAACTTTATTGCAAAGAATCAGTTACCAGACCAAGCGCCTCGCTCGTATGTTGTGCAGGCCCTCTCCTCTATCGTTGGTCCGGCGGACGTTGAGGACTTGGCGTTGTGCCCTGTTAGAGCCCTGCACCAGTACATCGAGAGGACCAGATCTTTTCGACAACATCAGTACTGTAAGAAACTTGCCGAGCGTGAGAAGTGTGCGTATTCGAGCAGTGAGAGTGACGCAGGTCAGCGATCGGACAGTGACGACGATTCACTGATACATCACCCATTTGTGATTCGCGACCCAGCATCACAGCCCAGCATTGTTCTCAATATTCGGAATTCCAAGCAGCTGCCTGTTCGAACTCCCCAGGAGACGGTAATGGAGTCAGCACAGCTCAGACTTCAGTTCCCTGTGTCCAGCGGAACGTCCCATCGCGCCAAGGAGGGGGAATGGGTTCCCGTGCCAAAAACAACAGCAGCCGCTATTGCAGCACCAGCGGCTGCACTAGTGACGGCCGTTGCTGTCGGTGATATCAAAGTAGCTGAAGTGAGCAGTGTGACTACTCAATCTGCAATAATGCCAGCTCCTGTCGCTCCACCACCACCACCACCACCTGTCCCTGCATCGGCTACAACTACAGCAGCGGTTCCTGCCGTTGAGACTAATAATGCAGATAAAGTGTTTCCTGATCCACCACAAAAGGCAATCGATATTGGCAGCATCATAAGTGAGCGGCTGCATGCAGCTCGGAAGTTAGCGTCTAACCCATACGATGTGCAGGCACTGACGGCCATGCACCACGTACAACAAAAGGCAAGTCGATGGGCGGAGTCTAAACACCTGCCCGGTCAGTTCATTGGATCGACCGGTGTCCAGACATTAACCCCGCAAGAACTGGCTGCTGGAGATAAGAGAAGCCAGCCGTGGGCAAGAAAGGACCTGTTTAAAAGAGCAGCCCCTGTAAAGGGTGGGATTGGCATGTTCCTGCTACAGAAGATGGGGTGGAAGCAGGGGGAGGGGCTTGGCAAGGGTGGAGTGGGCAACTTGGAACCCCTTATGTTGGACGTCAAGTCTGACAGACGAGGTTTACAGTCTCAGGGAGAGGGTGGAAGAAAGGTTCCTCCAATCAGAATGCCTGTTGCAACTGCCAAGGATCTGTCCGGAAAGCATCCGGTTTCCGCACTCACCGAGCTGTGCAACAAGAGGCGGTGGGGACCTCCCAACTTCGTGTGCATCCATGAGAGTGGGCCTGACCACAAGAAGAATTTCTTATTCAAGGTGATCGTGAACAAGACGGAGTATCAGCCGAGCGTCGCCAGTGTAAGCAAGAAACTGGCGAAGGCACAGTCAGCTACCACCTGTTTGCAGGAACTCGGACTGATTCCCAGAGTGTGACACCCGCTCAGGACAACACAGTTTCAGAACTTGAATTAATTACCTGGGTGTGGTGCCCACTCAGTGACAACAACATGGTGTCAAAACTTGAATTAATGTTGCGTCCATTTGTGCTTATGAATATCATATATTTATAACTTCCATATTGTTAACACAACTTCACCAAGTGGAGAGCGTTCAGTCGATTTATGGACAATCTGCACTGTCTGTCCAATCTCACACACCCCAACTCTTAATTATCATGGGTGAACCAGTTTTGGTGAGCATAAGCATTCAGTTCTAAAGCATATGAATATTTATAAACAGACAGCTGTTATCCAAGTAGCTACCTTTTTATTAGTATTTCTATGTTTCAAATGAGCACTAAACTAGCTGCTAAGTAGCTAAATTTACTGCAAGTGTGTCACAAACTGTAGCATGCATCTGCAATAAATATTGTTAACTACGCAACCTGTTTCAGTGAGTGAAACATTTAGTGGTATAGCTTACAGCAAAACATTCTAACAAAACTTTTCAGTGTTTTATCAAAACATGTATGTTCAACAAAACATGCACTTTTAAAGGTTTTAAGGTAAATTATAAAACGGATTCCTCGAGAACCAATGTTAACAAATATCATTTTATGAAAACAAATATAACAGTTCTGATATCTTGTAATCGTGTTATAAGTTGAGCAAATGAATGGTTATAATCATAAAATTGTTTGGTTAGAAAATATAAGCTGCATTCTGAGTTTTAATAAATATATATGTAAACAGATATCCAGAAAGATATTTATGTTAAAACATAAGGACCATGGACCTAATTCACTAAACTCTCACAATTTTGCGATCTCGCAGTGCAATGCTAAAAGACTTAACAAAGAGGATGCTTTGTTGTCTAACAGAACCTAAGAGAGCTTTGTGAATTAGGCCCCATATATTTTTGGCAAGTATCTACAAAGAGAGTTTTACCAGCATGACAATCATGTGACTTCAATAACCAAATATTAGTACACCTGAGAACAGACAAAAATAGTTTTTAAAATTAAGTTTTCTCTCAAATAACAGTCTTTGACAATCAGAGAAAAAAGGTATTAAAAAATGTGCCGTATTAATGAGTGGGTTAAGTTCAATCTTATTTTCCTTACTGGTTTCAACTTTATTTTTACAAACATTTCTGTGAATATGACAGACATTTGTTTACTTTCCCCATGCAAAAATCAACAATGTCAGAAATATTCAAGTGTACATACTATAGTGCACAAACGACAGATACATCAATGATTTGTGTTTGTTCTGCCATTATTTGCCACAAGTTGTGAAGATTGAGACAGAAAATCCAACCCCAATTCGCAAGTTGTGTTCTCGGGTTAATTCGCCAAACGAATGCTCTTCACGATATTCACGAATTTTAATAAATGCAGAAAAGTACCATAGTGTGATGCTCACTCAGTGACAAGTCAGGACTAGCTCTGGGTGAGCAAAACATTTCACCAAATTGTCTATTAAACTTTAAAAATGACAGAAATCAATATTTTTATGCCAATTATTACATGAAATTATTTTGTCAAATTAAAATAAAATTTGCCAATTGCTTTCAAAATTCGCAATTGGCGAACTTGGTGAGTGCCAGAGTTAGCCCCGACAGTGTAATCACATAGTCCATAGGAATGTGGCTGTGTAGTTCTAAAAGTGAAACTGTCTCATGTACGTCTGCAGGAATTTGACTTGGTTCTAAGTTTGCTGTATACAGAGTTTATTGTAAACATGTCAATAGAGCACTGTGTTTCCAGGACGTGTCATTCATACAACACAATATGTGGATGATGTACAGTGGAACGTTGATAACCTGGACTCCAGTGGTCTGGAAACCCTTTCTTATGGACAGCTGAGAGACTCAAAACCAACATTTCACTCTGTAATTGTGTTCGTTAATCCGTATATTCAGCTTTCAGAACTAGATGGTCATTATCCAAAACAAATTTTGGTGATTGGATTGGGCTATTTCTCACTCTAGCCAATGCACCACGACTGGTATATCAAACTTGAAAGGACGTGGTATATGGAATGGTATGGTGCATCTAATAGATCCCTTGCTACTAATGGGAAAATGTAGCAGGTTTCCTCTTCAAAACTATGAGATATATATATTTGTAAGTTTTGTAATCCTTATATTTTGTTTCAATTTTTAAAAATTGTTTTGACATTCAATGGAAATAACTTTTCATGTATGATTCAGTCCTATGGAAATTCATTAATCCAGATACTTTGAAAAAATAAGTACTATACAGATTAACAACATTCTGTTTTACATATTACGTGTGTGCGTGAGTTTGTTTGTTTGTTTGTGTTTGTGTGTTTAATTTGGACAGATGTTAATAGGATGTGAGGTGTATGTTTTAAATGAGCAGGAATATAATTGGACATCACTTTGCAAGCCAAGAGAAATGTCTGCCGTATTATGACAAACCTTAAAAGAGGTTAATCAAATGTGATGTCATTCTTTACGAATTATAGCTAGTCACGATTCTAGTCTGGTGTGTGTTATTATTATAACATGTTCTTGCTTCTGTTCAGTTAAGTCTCAAGGATACACACATCTGCTATTTGAGCTGTCTGTTAATTGTTATGAAAAGATGGCATAGAAACCTTCAAAATTCAGATCATATTGATATGATAATTTAATACAGACAATAACAAAGCAATTATGTGATAATGATAAAAATAAAATCAATTTATTATCAGCTTTTATGGCAGCACTGCTGGTTGGTGTGATAAATGTCCTGGGCTGTGTATCACCCTGGCATCTCCCACTGAGTTGTGCAATCACTGGATAAACCCAGTACTATCATATCGCTTCAAGAATCCATTTATATCTTCTGCTTTTTCGTTCCTATATGTAGAATTTTCTGCCGACAATTGAATTTTTTGTCTCACCTTAAGAAAATCGAAAGGTGATTTATAGGTATTACTTTTCCAATGGTGACGGCGTTAACTAATGATGCATTTAGCTCCCTTT

Transcript

ctg316-2.1-1

Protein

Gene family

Gene family	Subfamily
-	-

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF00035	dsrm	Double-stranded RNA binding motif	Domain	Interproscan
PF01585	G-patch	G-patch domain	Family	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR000467	Domain	G-patch domain	Interproscan
IPR010998	Homologous_superfamily	Integrase/recombinase, N-terminal	Interproscan
IPR013762	Homologous_superfamily	Integrase-like, catalytic domain superfamily	Interproscan
IPR014720	Domain	Double-stranded RNA-binding domain	Interproscan
IPR032922	Family	Protein SON	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR46528	PROTEIN SON	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0003676	Molecular Function	nucleic acid binding	Interproscan
GO:0003677	Molecular Function	DNA binding	Interproscan
GO:0003723	Molecular Function	RNA binding	Interproscan
GO:0006310	Biological Process	DNA recombination	Interproscan
GO:0015074	Biological Process	DNA integration	Interproscan
GO:0043484	Biological Process	regulation of RNA splicing	Interproscan
GO:0048024	Biological Process	regulation of mRNA splicing, via spliceosome	Interproscan
GO:0051726	Biological Process	regulation of cell cycle	Interproscan

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID	Source
-	-	-	-	-	-

Expression pattern

1. Expression trend for ctg316-2.1-1 global RNA-seq network