Gene detail

Detailed information of ctg312-0.1-1 in Gigantopelta aegis Gene info

Gene ID	Annotation	Chromosome	Start	End	Strand
ctg312-0.1-1	THYMIDYLATE SYNTHASE 1	chr9	3247284	3258444	-

Gene Structure

More details in Jbrowse Sequence

CDS

ctg312-0.1-1

ATGTATGACTATTTATCATCCCGCAAAAACCAGTTTGGTTCACTTGTAGGTTTTCCACTCTTGACAACAAAGCGTGTGTTCTGGAGAGGGGTTGCTGAAGAGATCCTGTGGTTTATCAGGGGCTCGACGAATTCCAAGGAACTCAGTGACAAAGGAGTCAACATATGGAATGCTAATGGATCAAGAGCTTTCCTAGACAGTCTGGGAATGACCGAACGAGAAGAAGGTGACTTGGGCCCAGTGTACGGGTTTCAGTGGAGACATTTCGGAGCCGACTACAAAGACATGCACACGGACTACAGTAGACAAGGAATCGACCAGCTCCAGTCTGTCATAGAGAAAATCAAAAACAGTCCTGATGACCGGAGAATCGTTATGTCAGCGTGGAATCCACCAGATCTTCCTAAGATGGTTTTGCCTCCCTGTCACTGTTTGGTTCAGTTCTATGGTTTAGGAGTTCCATTCAACATTGCAAGTTATTCTCTCTTAACTTGTATGATTGCACATGTGACTGGCCTCAAGCCTGGTGACTTTGTGCATACATTGGGAGATGCACATATTTACGTTAACCACATAGAGCCGTTGAAAGTGCAGTTAAAACGTGAGCCAAGACCATTTCCAAAACTGATTATTAAAGGGGAGGTGGACAGCATTGATGATTTCACAATGGACAATTTGGAACTCGTGAAATATAACCCTTACCCAAAAATCAAGATGGATATGGCTGTGTAATCAGCAGATGGTTTTTTGTATAAATCACAAAAATCACTACAAATATAGAGCTCTGTAGATCATCACTTGATTGTGTAATGTGGACAAAAATAATCACAAACATTGTGGTTACAGGGTTTGAGCTGCTGCCAATTTCAAATAAGTGTTTGATTTGGTGATGATATTTAAAAAAAAAAATTATTTGAATATTTTATTTTCATTTTTGGTCACATTTTCACAGTATATATATATTTTTTTATACATACATACACAGATCAAAATTAATATACTGTGAAATAAAACAACAAACCTCTTGCCAACACGTCATTGAACCTCACTCAGTACTAAACACTCAAATTGTTTTATACATGTATATATATGGTAATAAATACTTAAGATACTGTCAGTGGTGGATGACCTAGAGATATTTATTCAAACAACTTATGGTATACACTCCATCTTTTATTAAATTCATTATATTTGATTTTATTGGAATACATTTTTTTTTCTAATGTATAATAAGAACGTATATGATCCATCTTGTTTTTCCTTCTAATTCTGCTAGCATCTCTAATCTTTCAAGTTATTTTACCATCCAACTCCACTCCCAAGTCCTTGTCTGTATATCCACATAATATGATTGTCATTCGTGACATACACCTGCACTCCCTAGTCCTTGTCTATATATCCACATAATATGATTGTCATTCGTGTCATACACCTGCCAACGTTTGTTGTGCACATAAGTTTGATTATTTCAAATAATGATCAGTGGTCACGTGTTGCACTGTTAAGAAGGGGATGCAACCACCTTTTATATTTCCTTGCTACCGACTGTCATTTGCAAATGATAATGATGATGATGACGATGATGATTATGATGATAATAATGATGACTTCGATAAGCATGATGATTATTATATTCATAATCATTTGTCTTATTATTTTATTAATATCTTTTTATCTTCTTCATTTTGCTTTCCTCTTTGGATAGTTGGTAAGTTACGTTCACTTGAGCATTACACATGTGAATTATACTAAGTGCATAACTGTTAATAACTGACAGAAGTACTGACCCTGTCCTAAGTGTAACTAATATATTTATTCTACATTGTGTTAAAGACATATTTGACTTATTATACTCTTGCTGTGTTTTCGTTTTTATTAATGGAAATACATTGTTATAAAGCAGAAACAAACACAGCTTTTTTGATAGAATAATATTCCTAATTTATCAAAATTATTAGCGTTTTTTTAATATTGGACAAATCCCTTTATGGAAGCTTTATTAGGGTTCGTAGCGGTCTATAAATTCCTTGCAAGTGTTTGAATTTGAAAAACAAATGGATTTTTCAGGTCTTTGGAAGTATTTGAATTGTAATAAAAGTCTTCAAAAGTCTTTAAA

Transcript

ctg312-0.1-1

Protein

Gene family

Gene family	Subfamily
-	-

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF00303	Thymidylat_synt	Thymidylate synthase	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR000398	Family	Thymidylate synthase	Interproscan
IPR023451	Domain	Thymidylate synthase/dCMP hydroxymethylase domain	Interproscan
IPR036926	Homologous_superfamily	Thymidylate synthase/dCMP hydroxymethylase superfamily	Interproscan
IPR045097	Family	Thymidylate synthase/dCMP hydroxymethylase	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR11548	THYMIDYLATE SYNTHASE 1	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0004799	Molecular Function	thymidylate synthase activity	Interproscan
GO:0005739	Cellular Component	mitochondrion	Interproscan
GO:0005829	Cellular Component	cytosol	Interproscan
GO:0006231	Biological Process	dTMP biosynthetic process	Interproscan
GO:0016741	Molecular Function	transferase activity, transferring one-carbon groups	Interproscan

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID	Source
-	-	-	-	-	-

Expression pattern

1. Expression trend for ctg312-0.1-1 global RNA-seq network