Gene ID | Annotation | Chromosome | Start | End | Strand |
---|---|---|---|---|---|
ctg2923-0.4-1 | RIBOSOMAL PROTEIN L5-RELATED | ctg2923_pilon_pilon:::debris | 117857 | 120848 | + |
CDS | |||||
ctg2923-0.4-1 | |||||
Transcript |
ctg2923-0.4-1 |
Protein |
ctg2923-0.4-1 |
Gene family | Subfamily |
---|---|
- | - |
Pfam accession | Pfam name | Description | Type | Source |
---|---|---|---|---|
PF00656 | Peptidase_C14 | Caspase domain | Domain | Interproscan |
PF14204 | Ribosomal_L18_c | Ribosomal L18 C-terminal region | Domain | Interproscan |
InterPro term | Type | Description | Source |
---|---|---|---|
IPR001309 | Domain | Peptidase C14, p20 domain | Interproscan |
IPR005485 | Family | Large ribosomal subunit protein uL18 eukaryotic/archaeal | Interproscan |
IPR011600 | Domain | Peptidase C14, caspase domain | Interproscan |
IPR025607 | Domain | Large ribosomal subunit protein uL18, C-terminal, eukaryotes | Interproscan |
IPR029030 | Homologous_superfamily | Caspase-like domain superfamily | Interproscan |
PANTHER term | Description | Source |
---|---|---|
PTHR23410 | RIBOSOMAL PROTEIN L5-RELATED | Interproscan |
GO terms | Category | Description | Source |
---|---|---|---|
GO:0000027 | Biological Process | ribosomal large subunit assembly | Interproscan |
GO:0003735 | Molecular Function | structural constituent of ribosome | Interproscan |
GO:0004197 | Molecular Function | cysteine-type endopeptidase activity | Interproscan |
GO:0005840 | Cellular Component | ribosome | Interproscan |
GO:0006412 | Biological Process | translation | Interproscan |
GO:0006508 | Biological Process | proteolysis | Interproscan |
GO:0008097 | Molecular Function | 5S rRNA binding | Interproscan |
GO:0022625 | Cellular Component | cytosolic large ribosomal subunit | Interproscan |
KO | Enzyme | Enzyme ID | pathway | mapID | Source |
---|---|---|---|---|---|
- | - | - | - | - | - |
1. Expression trend for ctg2923-0.4-1 global RNA-seq network |