Gene detail

Detailed information of ctg2883-0.2-1 in Gigantopelta aegis Gene info

Gene ID	Annotation	Chromosome	Start	End	Strand
ctg2883-0.2-1	ANKYRIN REPEAT PROTEIN	chr13	2107050	2109437	-

Gene Structure

More details in Jbrowse Sequence

CDS

ctg2883-0.2-1

CTGAACTCCAACATCTATGTTACCACAAGATCTCACAAGAAAGGCGAGACTACCCTCGATGATCTAGGCATTGTGGTCTTGGTGGGACGTCCAGGGTCAGGAAAGACAACTCTTGGTTTGTATCTCATGAAATACATCAGGAAGATAAAACAGAGGCAAGTATTACTGTTGCAGCATCCTTCACAGTTTGATAAAATACAGATTCCACATAATTTGATGTCTGCCACGGAAAAAGAGAAACTTGTTATTTTAATTGATGACATATTTGGAAGAAGCAATCTCATACATGAATATGTACAAAAGTGGGAACTGAATTTTCCCAGAATGTGGGAATTAGCGAAAGCTGGCTTAATAAAAATTATAATAACATGTAGATCACAAATATTTCAAGAATGTGAAAATAATTTGAAGGATTTTGATGTTTTTAAAAAGTGTCACTTATTGAACTTGCATGATTCTGAGTATTGCCTGACTACAGATGAAAAAAGAGACATCCTTAATCGACACCTAAAAGCATGTACAACAATAAACGACACCTTATCAGAAAATGAGAGGGAACTGGCTGTAGATCTGACCTTTACCGAGCTGGGATTTCCTCAGTGTTGTAGCTTTTACGTAAACTCCCCAGAAGCACAGAAGCGTGGGATGGACTATTTCAAGAATCCTATCGAATACCTCAAGCGACAGTTAGATAATATAAAATTAGACAAGGATAGTCAGTTTCAGTATCTCGTTCTCCTGATCATAATGTTCAAACGGGGCACGTTGAAGGAAGACTGTCTGGATCCATTTCAACAGGACAAAGAGACACTTCGTCTGATTAACACTCTGAAGAATGTATGCACTATTAACACTGGCGTCTCTCTTGGCCAGATAAAAACAGCTGCTCAATCTATTACTGGCGTCTACCTCGAGTACAACGAAATCAACAAATCGTATTCATTCATTCACCAGTCAGTTTTTGACACATTGTTTCTGCAGTTTTCTGGCGAGTTCCTTAAGAAGAGCATTGAAGTTTGTCCTGTATCCATGCTTCTTGAGTACGTTGTAACACCACGTGCGCCCACTAGAAGCATTGTTACAGTGATGGTAAATACGGAAAACGACAGATTCCTTGCCGAAAGGCCCACTGATGAGTTGAAAGGGACTCGGCACGTTGAGGACGAAACGAATGTGCCAAACATCAGAACCATTCTTTCCCACCCGTCATTCAAAGACGAAGAGTTCGTGAATTTTCTCACAGAAATAGTCTGGAACAATGAGGTTCCCGCAGAAATCTTGAACCAGAAGCTTGATGCTCAAGAACTTGACGTTGAAGTTGCTTTTAGCGAGGACACACTAGAAAAGACCTGGAAGTATGTTGGAAATAGAAACAAAATTATTTTGGATGACATAACCGTTCGCGGTTCGATTACCGCTATTGCTATTTCTACATCGCCAGGAAGTCTAGCAGTGACAAACAATCTTAAAGCATTGTCCAGCCATTTTGTATCCAGTCTTTGTAAATCAGACTCGAGTGAGTTTGGACTGCAAAAAAAGGAGATTTTAGATGTTGCTTGTTTGGTTGGAAATACAGAAGTAGTTGACATGCTGCTGAATTCGGGGATTGCTCCAACAGTAAGTTCACTTTCTGCCGCAGCAGCATCAAACACTGATGATATGGAAATATTTAGAAATTTATTGAAACCAAGGAACGACTTGGAACTGGGATCGTCTGATTTAGAATCGATGTTGTTTCTAGCACTTGAGCAGGAAAATGGAAGAATATCCGGTCTACTGATTGACGAACTCACAAAGATGGGCAACAACTCCACCATCCTTGAAAAAGCTGCAAAACAACTATTACTTCAGTGCCACAGAGGTTTCGTGTATTATGTAGAAATGGCCATGGAGTCTAAAAGTAGTTCGAGAATTGGAGCGGGAACTCTGTTTAGAAGGTTATTCAGCTACTCAATATCATTAAAACCTGAAGTTGTTGTCTCTTTGGCAGCTGCCCATGATGATGGTGCTGTCCTGAAAGAAATTGTACGTGCGAATCCAATGAGGTGGAATACCATGAAGGGAGATAAAAGTCCATTACATATAGCAGCTTATTATGGATGTGTGGACTCTGTGGCTATTTTGATAGAACAAGGATGTAACATTTCTGCAGTCAGTGAAGAACATCAGACTGCACTACATCTAGCAGCAAAACATAACACATCTGACATGGTTTTGTACTTGCTTTCAATAGGATCCGATCCTCATGTACAAGGTATAAATAAAGACACTCCTCTGCATTTAGCAGCCTATGAAGGGTCGTTGGATACAGTGAAGGCATTAGTAGAAAAGGGAGCCAATCTCCAGGCACGCAATGCACTTGGGAAGACACCACTTCATATCGCCTAA

Transcript

ctg2883-0.2-1

Protein

Gene family

Gene family	Subfamily
-	-

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF12796	Ank_2	Ankyrin repeats (3 copies)	Repeat	Interproscan
PF13637	Ank_4	Ankyrin repeats (many copies)	Repeat	Interproscan
PF20720	nSTAND3	Novel STAND NTPase 3	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR002110	Repeat	Ankyrin repeat	Interproscan
IPR003593	Domain	AAA+ ATPase domain	Interproscan
IPR027417	Homologous_superfamily	P-loop containing nucleoside triphosphate hydrolase	Interproscan
IPR036770	Homologous_superfamily	Ankyrin repeat-containing domain superfamily	Interproscan
IPR049050	Domain	Novel STAND NTPase 3	Interproscan
IPR050663	Family	Ankyrin Repeat and SOCS Box	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR24193	ANKYRIN REPEAT PROTEIN	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0000976	Molecular Function	transcription cis-regulatory region binding	Interproscan
GO:0005515	Molecular Function	protein binding	Interproscan
GO:0005634	Cellular Component	nucleus	Interproscan
GO:0016887	Molecular Function	ATP hydrolysis activity	Interproscan
GO:0045944	Biological Process	positive regulation of transcription by RNA polymerase II	Interproscan

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID	Source
-	-	-	-	-	-

Expression pattern

1. Expression trend for ctg2883-0.2-1 global RNA-seq network