| Gene ID | Annotation | Chromosome | Start | End | Strand |
|---|---|---|---|---|---|
| ctg2833-0.5-1 | TRANSLATION ELONGATION FACTOR-RELATED | ctg2833_pilon_pilon:::debris | 2645 | 5707 | + |
| CDS | |||||
| ctg2833-0.5-1 | |||||
| Transcript |
| ctg2833-0.5-1 |
| Protein |
| ctg2833-0.5-1 |
| Gene family | Subfamily |
|---|---|
| - | - |
| Pfam accession | Pfam name | Description | Type | Source |
|---|---|---|---|---|
| PF16004 | EFTUD2 | 116 kDa U5 small nuclear ribonucleoprotein component N-terminus | Family | Interproscan |
| InterPro term | Type | Description | Source |
|---|---|---|---|
| IPR009000 | Homologous_superfamily | Translation protein, beta-barrel domain superfamily | Interproscan |
| IPR031950 | Domain | 116kDa U5 small nuclear ribonucleoprotein component, N-terminal | Interproscan |
| PANTHER term | Description | Source |
|---|---|---|
| PTHR42908 | TRANSLATION ELONGATION FACTOR-RELATED | Interproscan |
| GO terms | Category | Description | Source |
|---|---|---|---|
| GO:0000398 | Biological Process | mRNA splicing, via spliceosome | Interproscan |
| GO:0003924 | Molecular Function | GTPase activity | Interproscan |
| GO:0005829 | Cellular Component | cytosol | Interproscan |
| GO:0030623 | Molecular Function | U5 snRNA binding | Interproscan |
| GO:0046540 | Cellular Component | U4/U6 x U5 tri-snRNP complex | Interproscan |
| GO:0071007 | Cellular Component | U2-type catalytic step 2 spliceosome | Interproscan |
| GO:1990904 | Cellular Component | ribonucleoprotein complex | Interproscan |
| KO | Enzyme | Enzyme ID | pathway | mapID | Source |
|---|---|---|---|---|---|
| - | - | - | - | - | - |
| 1. Expression trend for ctg2833-0.5-1 global RNA-seq network |
Maintained by Dr. Jiajie She in Longjun Wu's Lab & Pei-yuan Qian's Lab and supported by Southern Marine Science and Engineering Guangdong Laboratory (Guangzhou) & The Hong Kong University of Science and Technology
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