Gene detail

Detailed information of ctg259-1.1-1 in Gigantopelta aegis Gene info

Gene ID	Annotation	Chromosome	Start	End	Strand
ctg259-1.1-1	ANKYRIN REPEAT CONTAINING	chr4	113156497	113161408	-

Gene Structure

More details in Jbrowse Sequence

CDS

ctg259-1.1-1

ATGCCGAACAGTGTGAAACGCGGTCCGATGAGAGACCGTGATGTACAGTGTATCAAGACATTTTCCGTGCGTATAGAGCAGGAGGTGGATGCCAAAGATCTGGTGCCATATCTTTACTCCGTGAACATCATAGACTACAATGACAAGGACGAGATCCTCCGTCTAGGCACGACGCGACTGGAGAGGATTCGAACCCTCGTGGACATTATTCACCATCGCGGAGTTGATGCCTTCAGTCACTTCACCCAGGCTCTCAATCTAAAAGGATACGTTGATCTGGCAGCCAAAATGCAGCAAGAACACGAGTATGAACCACAGAGTAGCTTCCTGCCCGAGTGCCCGCTGCCTGCCGACAGACTGAGACTGGTGGAGAATGCCTGGGAGTTGTTGAGCAGACGACTCACGAAGATCGAGGGGAAGCTCGGTCCAATTGAGATGGACTCTCCCGAGGACGAAATCGCGTCCATTAAACTAGAACTACAGGAGGTGAAAACCGTGACATTCGCTCGGATGCAGGAACTGACGGAAGAAAACCGAGAAAAAGACGCCAAGATTCAGATTCTCATGGAACAACTCAAAGGAAAAGATCACAAATTGCAGGAGGCGCAGGTGAAAATAAAACTTCTCGAAAAACGGACTCTGGATCTTGAGCGGAAGTTGATACTATCGAGGAAGGATATTGAAAAACAAACAAAGCTGAACAGAGATCAGCAGACTGAGATGAGGAACATGAAAGATCAGAACACGCAACTGTTAAACCGGACTACCACAATGGAGGCTACCATGGCGACTCAGGGAGACGCAATCCAGAAACTCCAACAGCAGTTTGAGAGCTGGACCGGAAAGAATAACAACTCTGGTAGGAAGAAGTCCGCAAAAACAGCCAAGGCGGTGGAGTTTCCGACATTACGATACAACTGTAAATACACTAATAAGATTTTGGATTCTGTGCAAAACAACGACATTCGTATGCTCAAATTGTTGCTGGCAGTTCCCCAGTCACTTAGCCAGCGTGATCTCGGCCAAGGTCTGTTTCTCTCCGCCAAACTCGGACACACCGAGTGTTTGAACTGCCTGCTACAGGCGGGCTGTGACATCACCAGCGAGGATGTACACGGCAATACGCCACTCTACGTATCTGTGATGTCAAACAGAGCGGCAGCGACTAAACTTCTTCTGGAAGCGAACAGCAGCGTCAACGCTCGTGGGAATGGCAAGAACACCCCGCTGCACGTTGCTGCCAAAATGGGCTACGACGACTGCCTCGAGATGTTGGTATCTCGCGGTGCCAGCGTGAACGCGCGAGACTCTGACGGCTGCACCGCGCTGATCCACGCCGTGAAGAACAAGCAGTACAACGCGCTACGTCTTCTATTGGAGTCCAGCTGCAACGTGAACCAGGCCGACAAGCAAGGACGGACCGCACTGCACCACGCCGCGCAGCGAGCGATGGCCATAGAACAGCTGCTGGCTTTTGGGGCAGATCCCAACATCTGTGACATAGACAACAACACCCCACTGCTGCTGGCAGCTACGGAGGGGTTCTCAGTCGTGGTCAGACTGCTAGCTAGAGCTAACTGTGATGTTAATATCGCCAACGCGTCTGTGCGGAGAACACCTCTACATATTCTGTCCTTGAAAGGTCACGCTGACTGCATCGATGATCTAATAGAGGCCGGAGCAGACGTCAATCTGTACGACAAGCTGTTCCACACGCCGCTGTGGTACGCCATATATAACAAACGGTTTGACGTCGTCAAGCTGCTACTGAAGGCCAACAGTCAGGTGGACACGTTTCAGTGTTCTAAAGAGGTCCCACTGGAGGCGTGTCCCACCTCCCTGGCTCTGTCTGGACGGATGACCGATGTGGTGAAACTCTTCATTCTCACTGGCTTTGACCACGCTCATCTGAGGAGCTGTTTAGTTGACTGTCGCGTCTCAGACCTGTTTCAAAGTGAGGATCTCGAGGGTTGGCTCAAACAGGCGAATAGCGTGCTGTCGCTCAAACAGCTGTGCAGAAAGTGGATTAGACATCACCTGGGACGGATGTTGATGCACAATCTGAACAGCTTACCTATCCCCGAAGGGCTGAGAGACTTCGTTTTTCTTAAAGAGTTAGACGATCATCGCAGTAGCCACTAG

Transcript

ctg259-1.1-1

Protein

Gene family

Gene family	Subfamily
Ubiquitin Family	E3\|E3 adaptor Cullin RING\|SOCS

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF00023	Ank	Ankyrin repeat	Repeat	Interproscan
PF00619	CARD	Caspase recruitment domain	Domain	Interproscan
PF07525	SOCS_box	SOCS box	Domain	Interproscan
PF12796	Ank_2	Ankyrin repeats (3 copies)	Repeat	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR001315	Domain	CARD domain	Interproscan
IPR001496	Domain	SOCS box domain	Interproscan
IPR002110	Repeat	Ankyrin repeat	Interproscan
IPR011029	Homologous_superfamily	Death-like domain superfamily	Interproscan
IPR036036	Homologous_superfamily	SOCS box-like domain superfamily	Interproscan
IPR036770	Homologous_superfamily	Ankyrin repeat-containing domain superfamily	Interproscan
IPR050842	Family	Cul2-RING E3 Ligase Substrate-Recognition Fem-1	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR24173	ANKYRIN REPEAT CONTAINING	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0005515	Molecular Function	protein binding	Interproscan
GO:0035556	Biological Process	intracellular signal transduction	Interproscan
GO:0042981	Biological Process	regulation of apoptotic process	Interproscan

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID	Source
-	-	-	-	-	-

Expression pattern

1. Expression trend for ctg259-1.1-1 global RNA-seq network