Gene detail

Detailed information of ctg252-4.6-1 in Gigantopelta aegis Gene info

Gene ID	Annotation	Chromosome	Start	End	Strand
ctg252-4.6-1	HFM1, ATP DEPENDENT DNA HELICASE HOMOLOG	chr3	27288549	27321797	-

Gene Structure

More details in Jbrowse Sequence

CDS

ctg252-4.6-1

GGAATATGTGTACAAAATAATCTGTATTTGTTGAACATTAACTTTCTAATTAAATTACAGTAAACATTTTGTTTAAGATCATGAAATTGTGTTTTGTTTTCTTTTATTATTTAGAAATAAGTCATCTAGTACTGATAATTCTAATCGGAAGCAATGGTCATCTGTTGTACCAGCTGCCCCACAAGAACCTTTGTATGGTTTTCCAATGGATGAACCATTTGACAGATCTCTGTCCCAGGTTTTGCAGAGATCACAGGTGCAGAATAAACCAACCAAACAACTACCAAAGAAGTTCAAGGTTCCATTTGTGAATGATACATCCTTTGATGATTTGTCAGTAGACTCATTGCAGAACTTTTCACTCTCACAAGCTCTTTTACCATCACAAAAAAGACAAAATGGGAATATGCTCAGCTCCCAGAATGATAGGAAGAGGACAAGTAGTTTCAGTGATAAAGGACCTTTCATCCACTCTCATTTGAAAACTGCTGCAAATGGTGCAAGTCAGGTTTCCGTATCTCATGCAGTACAAAGTGTTATGTTTAACAACAGTCAAGCAAATACTCCAGGCAGAATCAGTTACTTATCTGATGCCATGACACCATCCAACAATACTGTCACTAAACATAAAACAAGCAAAGAGAAATATGCTTCTGAAAACAAAGAAAATTACAATAATTATTCAGGAATATTTAGTTCACCTGAATGCAAAATATCTAAATCACAAGATTCAGTTTTTAATGACAGTGTGACTCAAGGAGTAACTGATTGTCTGTTGACGCCAGCACCACTCTGTTTTACAGGACAGAAAAATGTCCAACACAAGTTACGATCAGTGGATGAGATTCCTGTCAGATTCAGGGAAATATTTGAATTCCCTTATTTCAACATGGTCCAGTCAATGGTGTTTGATGAGGTGTTTTATACTGACAAGCCTGTGGTTGTGGCTGCTCCAACAGGAGCAGGGAAGACCATCATCTTTGAACTTGCAATTATTAGATTGCTAACAAAACTCAAGAATTCTAGAACTAATTGGAAGATTGTTTACATGGCTCCCATGAAAGCTCTCTGTGCTGAGAAGTATCTGGACTGGAAAAGTAAATTTTCACCTCACAGTTTAAATTTGATGGAATTGACTGGAGACACGGAACTTGAAGACTTTTCTGAGTTGCACCAAGTGAATCTTATATTAACCACTCCTCATCTGCAACATGTAGACATATTCTGGTATCTGCCTCTTCCTGGTCAGATTCTGGCTCACTGCTGCCCTTTGTCACAACTGAGTGACCAGAGGACTACTTTGTCTGGTGGAAAATCAGTGGCTTCAATATATTCAATTCATATTGTGAATGACAGTAATCGAGGAGCAACTGTAGAAGCTGTTCTTAGTCGCATGAAGACTCTTCAGCTGCCAGAGAAATCCGCAGACCGATCTAACATGAGGTTCATAGCCGTGTCTGCTACCATGCCAAATATTGAAGATATTGCAAAATGGCTTGGCAGCGGTGTCAGACCAGCAGTACACTACAAGCTAGATGAGAAGTATCGTCCTGTTCATCTTCAAAAAATTGTCATTGGATACCCCTTCAAAGAAGGCTTTTCAGAGTTTCGCTTTGATATGAATCTGGCATATAAACTCAAAGGAATCATAGATGCATATTCAGAGCATAAACCAACACTTATATTTTGTTCTTCACGAAAAAGTGTTCAGTATACAGGCGAAACTCTGAAAAAGGAGCATTATGGAAGATCTCTTCTGAAAGCACAGCACCGAGATCACGTACAAAGGATATCAAGAACATTAAATGATTCAAAGGTTTCAGAGCTGGTGTACCTAGGTATTGGAATTCACCATGCAGGAATGGCAGTTCAGGACCGAAATCTTGTGGAAAATTTATTTCGTGAAGGACATTTGCCAGTTCTCATTTCTACAAGCACCCTGGCGATGGGTGTCAATCTTCCCGCCCACCTTGTTGTGGTCAAGTCAACAATGTTCTACAACATGGGAGTCCCAACGGAGTACTCAGACACTCAAGTTCTCCAGATGATTGGACGGGCAGGTCGGCCACAGTTTGATAAATCAGCCACAGCTGTTATTATGACTAAAGCTTCAACAAAGTCAAAATATGAATCACTGATGAATGGCACACAACTTATTGAAAGCAGTCTTCATAAGAATCTTATTGAGCATTTAAATGCAGAAGTTGTGTTGCACACAATAACAGATATTGCACTGGCAGTGGAATGGATCAGACACACCTTCCTGTACGTTCGTGTCATGAAAAATCCAAGACATTATGGTTATCCAACTGGATTGGACTGGAAGCAGATTGAAAAAAGACTAGAAGACACTGGCAAGCTGATGGCAAGATATTGCATTGCTTTTGAAACTATGAAAAACTTTCACAGTGTCAAAAGTGATGCATCTTTGAAAGATCTGATTGATGTGATAGCTGGCTGTCGTGAGTTTGAGGACATTACTCTGAGAAACAATGAGAAGAGTGTGTTAAACACACTTAACAAGGACAAGCATAAGGAAAATATCAGGCAGTTATCAGTTCTTAAAAGTGAAAGCTTGATGGAATTTTTGTGGCAAAAGAAAGATTACACTTCACTTCTGACAGCCATTCAGCTCTTCAAATGCATGAAAACAAAACTGTGGGAGGATTCAAAATATGTCACAAAGCAGCTAGATGGAATAGGACCAACAATGTCTCTAGCTCTTGTAAATGCTGGATTGACATCATTTCACACTTTAGAAGATACCAATCCTAGAGAAATTGAACTGATTGTAAACAGACATCCACCATTTGGGAATCAGATTAGAAATGCTGTTGCAGCTCTACCAAAGTATGAAATGGCAATAGAACAGCTGAAAAATTACAAGCCACAATCATCAGAAATTGTGATCAGCATTAACCTGGTGAACAAGGAGGCGATCGTGGACTACAAAGGTGGAAAGATTGACCATCAGTCAGTTCTCCTCATCGGGGATCAGGACAATTCAGTGGTGTTCAAGTGGAGAATCATAGACGCATCTATTGTGCGTGATGATGGCTGGAGTCGGAGGATTGAGGTGAAGAGAGCCTCAGGTGGACCGGATCTTCATGTACATCTGCTGAGTCAAGAATATGTTGGTTTGGATATTCATACAAACTATACTCCTATCTACACAGGCAAGTTTTGCAGAGAGTCGAACTTTGAAGCTGCTGGAGGTAGATACAGTATTTCGAAAGAAATGCAGAAAACACCTTCAGGGACACAAAAAGACCGATCTTGTCATCACAAGTGTCTAAACAAGTCAGTCTGTGCTCATAAATGCTGCAAGCAGGGTTTGTCTAGCTTACCGAAGACTCCTGTGGGCTCACGTATGGGTGAAAACAAGCAGTCAAGACCCTGTGATACTACTGTGAGAGAGAAAAAAGGTGTTGAAGCACAAATTGGCATGTTAAAGAACAAGATGTTACAACTTAAAGATGCCATGCCCAACTCAAAAAGACAAAATGATTCAAGATTATCAGGTTCAGCAGTAGATCTGGATCGTTTTGCTTACCACAAACCAAGCCCTCTTAAATTAAGGACCACAGACTTGCCACCAAAACCTTTACCTCCATCAAATGAAGCAGAACCATCAAACTACAAGCAGCAAGATAGTACTGGAGGCTGGACTCAACTTGAAATGTACCAACAAGAGAGGGAATCTCTTGTTCAACAGGATGCATTTGACATTGGAATGTTTGGTACTCCAGAAATGCTAGATCAGAATGTAGAAGATATGATACAGGACTATGACTTTGAAGAACACAATACCAACCAAAAGCAAAATACACATCAATGGTCTTCAAGTCCTTTTAGTGATGAAGAGTTGTGTCTTGCCGAGGAGATGGCTCAATACAGCCAATACAACGAGAGCTTAAACACTGCACCAACAGATGAACTTAAGAATCAAACCTCCAGACTAGACGTTTTTCAGCAGCCGCATAAACAACAAGCAGTACGTCACTCAGGACCAAAGTTCCATTTTCAGACTACAGAACCTGTTTCATGTACAAATCAGTCACATTATGTACAAAGGCAACTAAAAAGAAGTGTTCTTGATTCACCATATTTCCTAGAAAATCAAAGATCAAAACCACAAAACATTTCTCAAACTATTCCAATATTTGATGTGGATGAAAATCAATACATTTATCTTGAAGAATCGGCAAAAGAGAAACCTATGACAGTTGACAGAGTTTCCAAAAGGTTTGTGCCATACAAGAAGTTTCCTGCATACAGTAGTTCCAATATCTTTGATGAAGATGATGAAAACTATTACGACAGTGAATATAAAACATGTGGATCAGTGTTAGACAATATAAAGAAGAATCCTTCCATGTACACGATTCACGAGCCACCCAGTAATGACATCCACAATTCTCACCGGACTGCATCACCAAGACATACATATGGTCAAGTAGTGGCCTGGGTCAGTGAGGAACCAGCTTCAGTGAATCTGGAGAAATCTCAGCCATTGTCAAAACAATGCAAGACTCCACTTCTGATACCCGCCAGAAGTCCGTTACAGACACATTCAAAAAGTCCAAATCAAGCAAACTGTGAATTTATTTTTAATCAACAAGATATTTTACCATGTGAAGAAGATGCTCTGAATACCATCATGCCATCTTCAAATAAGACAGAGATGACCAGCAGTTTCTTCCAGCCATACAGATCAGATAGCATTGCTGAAGTACCAGATGTTGGAAGCAACCTTTTTGCTGGGATATTCTAATCAAGGACAAATTTAAACAAATTGATAGCTTATGCTTAATAAAATGACTATATACAACGCAGACAATCGCCAACAACAATCAGCAATGCTGTGGAGGTTGCTGCAGTTTTTCTTTCTCTCTAGCAATTGCTGCAGACTATAATCAATATTTTCCCCATGGATATTATCTTAACTGCTGGGGTTGTATATAATATTCTGCCAGGTTTTTTGTGTTGTACCAATCATATTTTATTTGTTATAGTTGCTAAAAACTGTGATAAAATATTTAATTTTTTACTTATATCTTAAATAATTGTATTAATTAATAATAGGCTGTTCCAAACATTTTTACATGAGGGCAGGAGAGCCACCCAAATTGTTTTATAGATATTATTTGTAATGCAGATTATCTCGAGTGGTGCAGGTTAGAAAGCTTTTATTCCACCACCAAATTTCTGACCGAGGCAATTTTTGAAATACATGTATAAATACTGAACAGTTTTTAACAGTTGCTGGACACTTAAAATTGAATACTATTAATAAAAGTATTTTCAAAATATGTTTATGATTCTGTTATATCTGGGTGGGACGTAGCCCAGTGGTAAAGTGCTCGCTCGATGCGCGGTCGGTCTGGGACTATTTCTCGTTTCAGACAGTGCACCATGACTGATATATCAAAGGCCGTGATATGTACTACCCTGTCTGTGGGATGGTGCATATAAAAGATCCCTTGCTGTTAATCGAAAAGAGCAGCCCATGAAGTGGCGACAGCGGGTTTCCTCTCTCAATGTGTGGTCGTTAACCATGTCTGATACCATATAACCATAAATAAAATGTCGAGTGTGTTGTTAAATAAAAAAAAAAATTCTGTTACATCTGTAGACCATGTGATTTGTCCATTTATTCATGTACAAAACAAGATTGAGGCATGATGTGGCAAGGATTCTGGTAGGATTTATAGAACATATTCAATTAAGAGAGGATCAACCGAACTGCTTTCAAAATCTGTTTAACTAATGATTTTGCTTCTGGAATTCTTTTTATTACATGATCAACGGTTTATTGTAGACCAAATATCTGATAGTAGTTCAGTTTTAAGTCTCATATCTAAACAACTGACAGACTATCAGACCTTGGTGTATATATGATTTAATATTAGTCTTTATTACCTCATGCATATTCTACACGACTTCCAATTGGTCAACATGACGTCAACTTGTCAATTGTGATTCCATTTGAGATCATATTGCACTACTCTGGTTTTACGAATCCATAAATCCTGATATTGCACTATTTCAGGTGTAAAACGGAATCTCCTTACCAGTGAGTGCTTCATGGATTGCTTGACAGAATTTGGAAATTGTAGTGTCTTATGTATGAAGTCATAGTTAGCAATATATTTGTGCTTACTATATTGTATAGTGCACGACTCGCACTGCTTGTAATTGGACCAAGTTTATGTTTTGGGGTGTTTTTTTAATAAAACAATTTTGGCACTGAGATGAGACCAATATGATGTTTTATGAAGCTCAAAAAATTAATATCAGCCTCCGACCTTGATCAATATTAGGTTTTTTTATATCTCTATACAACATTGTATTTGTCTCATCTCAGTGACATAATTGCTTAATATTCATCTATTTATTCTTGAGAAATTGTGTAAACAAGGTCTTGGTCACCATGGAATAATGTAGGAATAGAACAAATTCACACGTCCAACATAACAGAAAAAACATCAATTTTTCCTGATGCTAATTTTTTTGTGGTTTTTCATACTTATTAGATAAAATACAGCAAACATACTGGATGAATTCTACTGCCAGAATATTTGCTACTTGAAAATAAAATTAAGAACAAAACACAAAATTAAATTTCAATTTTGACTTTTTTCTTTTTTTGTTTCGTTTTAAAATTGTCATGTTGCAGGTTCACTATTAAAATAATCTGTATCAGTATTCAAACTTCAAGTCAAAATAGGACTGATCAAAGGTGTGTACTCTAACATATCCATCTTCACCACCACTGCAGTAACTAAAACAAAAGAAAAATAATTTTTGTTAAAATGTATAGCAATATGACGGGGGTTGGGTACTTGTGGAATGAAAAAGGTATATAAATATAATGTTATTTTTCAAGATATAAATGTTAACAAAAATTATATATTAAAAAACAACATTCTGGAGGTAGCTGGAGTAAAAGTTTAAAAAAACAAAGAACTTGAAAACAAAAATAATATAATATATCTGATACATCTGTAATTATTTGTTTCCTAAATGCATCTTGGCAGAAAGAGAGAGAGAAAGTTATCCAGTTACAGAATAATAATAAGTAACATAAACTTATGCAAAGAACTGTTACCTTTTGCCATCTGGATGAAACACA

Transcript

ctg252-4.6-1

Protein

Gene family

Gene family	Subfamily
-	-

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF00270	DEAD	DEAD/DEAH box helicase	Domain	Interproscan
PF00271	Helicase_C	Helicase conserved C-terminal domain	Domain	Interproscan
PF02889	Sec63	Sec63 Brl domain	Family	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR001650	Domain	Helicase, C-terminal domain-like	Interproscan
IPR004179	Domain	Sec63 domain	Interproscan
IPR011545	Domain	DEAD/DEAH box helicase domain	Interproscan
IPR014001	Domain	Helicase superfamily 1/2, ATP-binding domain	Interproscan
IPR027417	Homologous_superfamily	P-loop containing nucleoside triphosphate hydrolase	Interproscan
IPR036388	Homologous_superfamily	Winged helix-like DNA-binding domain superfamily	Interproscan
IPR052247	Family	Meiotic Crossover Helicase	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR47835	HFM1, ATP DEPENDENT DNA HELICASE HOMOLOG	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0003676	Molecular Function	nucleic acid binding	Interproscan
GO:0005524	Molecular Function	ATP binding	Interproscan

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID	Source
-	-	-	-	-	-

Expression pattern

1. Expression trend for ctg252-4.6-1 global RNA-seq network